PlantSME Plant secondary metabolism enzyme database

Camelina sativa (camelina_sativa)

Imported from atlas release summary for Camelina sativa.

4681
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1387 20 BAHD (609) View species results
Alkaloid pathway 1089 21 NMT (202) View species results
Phenylpropanoid pathway 915 11 POD (421) View species results
Flavonoid pathway 567 9 UFGT (363) View species results
Rosmarinic acid pathway 366 7 C4H (136) View species results
Steroid pathway 357 14 SMT1/SMT2/SMT3 (141) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4417 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 880 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Gene Pathway Family Confidence Status
XP_010488201.1 Alkaloid 7DLGT low borderline
XP_010488203.1 Alkaloid 7DLGT low borderline
XP_010488204.1 Alkaloid 7DLGT medium pass
XP_010488244.1 Alkaloid 7DLGT low borderline
XP_010488757.1 Alkaloid 7DLGT low borderline
XP_010488961.1 Alkaloid 7DLGT low borderline
XP_010488962.1 Alkaloid 7DLGT low borderline
XP_010489287.1 Alkaloid 7DLGT low borderline
XP_010489288.1 Alkaloid 7DLGT low borderline
XP_010489291.2 Alkaloid 7DLGT low borderline
XP_010489475.1 Alkaloid 7DLGT low borderline
XP_010489562.1 Alkaloid 7DLGT medium pass
XP_010490009.1 Alkaloid 7DLGT medium pass
XP_010490444.1 Alkaloid 7DLGT medium pass
XP_010490831.1 Alkaloid 7DLGT low borderline
XP_010491074.1 Alkaloid 7DLGT low borderline
XP_010491132.1 Alkaloid 7DLGT high pass
XP_010491133.1 Alkaloid 7DLGT high pass
XP_010492024.1 Alkaloid 7DLGT low borderline
XP_010492304.2 Alkaloid 7DLGT low borderline
XP_010492637.1 Alkaloid 7DLGT low borderline
XP_010492649.1 Alkaloid 7DLGT low borderline
XP_010495081.2 Alkaloid 7DLGT high pass
XP_010495082.1 Alkaloid 7DLGT high pass
XP_010496151.1 Alkaloid 7DLGT low borderline
XP_010496152.1 Alkaloid 7DLGT low borderline
XP_010496576.1 Alkaloid 7DLGT medium pass
XP_010496578.1 Alkaloid 7DLGT low borderline
XP_010497198.1 Alkaloid 7DLGT low borderline
XP_010497205.1 Alkaloid 7DLGT low borderline
XP_010497499.1 Alkaloid 7DLGT medium pass
XP_010498706.1 Alkaloid 7DLGT medium pass
XP_010498707.1 Alkaloid 7DLGT medium pass
XP_010498708.1 Alkaloid 7DLGT medium pass
XP_010498931.1 Alkaloid 7DLGT medium pass
XP_010499590.1 Alkaloid 7DLGT low borderline
XP_010500378.1 Alkaloid 7DLGT low borderline
XP_010500695.1 Alkaloid 7DLGT low borderline
XP_010501351.1 Alkaloid 7DLGT medium pass
XP_010502543.1 Alkaloid 7DLGT low borderline
XP_010503281.1 Alkaloid 7DLGT high pass
XP_010503282.1 Alkaloid 7DLGT high pass
XP_010503287.1 Alkaloid 7DLGT high pass
XP_010503288.1 Alkaloid 7DLGT high pass
XP_010503290.1 Alkaloid 7DLGT medium pass
XP_010503291.2 Alkaloid 7DLGT high pass
XP_010503292.1 Alkaloid 7DLGT high pass
XP_010504073.2 Alkaloid 7DLGT low borderline
XP_010504074.1 Alkaloid 7DLGT low borderline
XP_010504414.1 Alkaloid 7DLGT medium pass