PlantSME Plant secondary metabolism enzyme database

Camelina sativa (camelina_sativa)

Imported from atlas release summary for Camelina sativa.

4681
Candidate Genes
104
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (96)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1387 20 BAHD (609) View species results
Alkaloid pathway 1089 21 NMT (202) View species results
Phenylpropanoid pathway 915 11 POD (421) View species results
Flavonoid pathway 567 9 UFGT (363) View species results
Rosmarinic acid pathway 366 7 C4H (136) View species results
Steroid pathway 357 14 SMT1/SMT2/SMT3 (141) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 4417 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 880 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
Reset
Gene Pathway Family Confidence Status
XP_019089408.1 Flavonoid C4H low borderline
XP_019098527.1 Flavonoid C4H medium borderline
XP_019101164.1 Flavonoid C4H low borderline
XP_019101165.1 Flavonoid C4H low borderline
XP_010417418.1 Flavonoid CHI low borderline
XP_010419421.1 Flavonoid CHI medium pass
XP_010423486.1 Flavonoid CHI medium pass
XP_010426629.1 Flavonoid CHI medium pass
XP_010427260.1 Flavonoid CHI medium pass
XP_010427262.1 Flavonoid CHI medium pass
XP_010427266.1 Flavonoid CHI medium pass
XP_010427268.1 Flavonoid CHI medium pass
XP_010429652.1 Flavonoid CHI low borderline
XP_010429653.1 Flavonoid CHI low borderline
XP_010444823.1 Flavonoid CHI medium pass
XP_010452429.1 Flavonoid CHI medium pass
XP_010472658.1 Flavonoid CHI low borderline
XP_010491060.1 Flavonoid CHI medium pass
XP_010495213.1 Flavonoid CHI medium pass
XP_010504357.1 Flavonoid CHI medium pass
XP_010516069.1 Flavonoid CHI medium pass
XP_019084884.1 Flavonoid CHI medium pass
XP_019084885.1 Flavonoid CHI medium pass
XP_019102363.1 Flavonoid CHI medium pass
XP_019102364.1 Flavonoid CHI medium pass
XP_010420005.1 Flavonoid CHS medium pass
XP_010447028.1 Flavonoid CHS medium pass
XP_010453497.1 Flavonoid CHS medium pass
XP_010456329.1 Flavonoid CHS medium pass
XP_010474834.1 Flavonoid CHS medium pass
XP_010474836.1 Flavonoid CHS medium pass
XP_010492176.1 Flavonoid CHS medium pass
XP_010497459.2 Flavonoid CHS medium pass
XP_010501268.1 Flavonoid CHS low borderline
XP_019086891.1 Flavonoid CHS medium pass
XP_019088180.1 Flavonoid CHS medium pass
XP_019088493.1 Flavonoid CHS medium pass
XP_019088494.1 Flavonoid CHS medium pass
XP_019090937.1 Flavonoid CHS medium pass
XP_019094325.1 Flavonoid CHS medium pass
XP_010414943.1 Flavonoid DFR low borderline
XP_010417131.1 Flavonoid DFR low borderline
XP_010421707.1 Flavonoid DFR medium borderline
XP_010425018.1 Flavonoid DFR medium pass
XP_010428708.1 Flavonoid DFR medium borderline
XP_010429343.1 Flavonoid DFR low borderline
XP_010432286.1 Flavonoid DFR medium borderline
XP_010437474.1 Flavonoid DFR medium borderline
XP_010446925.1 Flavonoid DFR medium borderline
XP_010455212.1 Flavonoid DFR medium borderline