PlantSME Plant secondary metabolism enzyme database

Codonopsis lanceolata (codonopsis_lanceolata)

Imported from atlas release summary for Codonopsis lanceolata.

2890
Candidate Protein Records
2489
Pathway-Level Records
6249
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 715 20 UGT (226) View species results
Alkaloid pathway 594 24 7DLGT (98) View species results
Phenylpropanoid pathway 439 12 POD (165) View species results
Flavonoid pathway 303 11 UFGT (197) View species results
Rosmarinic acid pathway 241 7 C4H (105) View species results
Steroid pathway 197 15 CAS (137) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 2584 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 329 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Protein/Isoform Record Pathway Family Confidence Status
codonopsis_lanceolata_Cl_chr06_16990T Steroid DWF4/CYP90B1 low borderline
codonopsis_lanceolata_Cl_chr06_18540T Steroid DWF4/CYP90B1 low borderline
codonopsis_lanceolata_Cl_chr06_25620T Steroid DWF4/CYP90B1 low borderline
codonopsis_lanceolata_Cl_chr06_29320T Steroid DWF4/CYP90B1 medium borderline
codonopsis_lanceolata_Cl_chr06_31230T Steroid DWF4/CYP90B1 low borderline
codonopsis_lanceolata_Cl_chr07_04010T Steroid DWF4/CYP90B1 medium borderline
codonopsis_lanceolata_Cl_chr07_04850T Steroid DWF4/CYP90B1 low borderline
codonopsis_lanceolata_Cl_chr07_04860T Steroid DWF4/CYP90B1 low borderline
codonopsis_lanceolata_Cl_chr07_04890T Steroid DWF4/CYP90B1 low borderline
codonopsis_lanceolata_Cl_chr07_04920T Steroid DWF4/CYP90B1 low borderline
codonopsis_lanceolata_Cl_chr07_04940T Steroid DWF4/CYP90B1 low borderline
codonopsis_lanceolata_Cl_chr07_04950T Steroid DWF4/CYP90B1 low borderline
codonopsis_lanceolata_Cl_chr07_05020T Steroid DWF4/CYP90B1 low borderline
codonopsis_lanceolata_Cl_chr07_05030T Steroid DWF4/CYP90B1 medium borderline
codonopsis_lanceolata_Cl_chr07_05040T Steroid DWF4/CYP90B1 medium borderline
codonopsis_lanceolata_Cl_chr07_05200T Steroid DWF4/CYP90B1 low borderline
codonopsis_lanceolata_Cl_chr07_07190T Steroid DWF4/CYP90B1 medium borderline
codonopsis_lanceolata_Cl_chr07_12150T Steroid DWF4/CYP90B1 low borderline
codonopsis_lanceolata_Cl_chr07_17810T Steroid DWF4/CYP90B1 medium borderline
codonopsis_lanceolata_Cl_chr07_18270T Steroid DWF4/CYP90B1 low borderline
codonopsis_lanceolata_Cl_chr07_18950T Steroid DWF4/CYP90B1 low borderline
codonopsis_lanceolata_Cl_chr07_22240T Steroid DWF4/CYP90B1 medium borderline
codonopsis_lanceolata_Cl_chr07_29830T Steroid DWF4/CYP90B1 low borderline
codonopsis_lanceolata_Cl_chr07_34560T Steroid DWF4/CYP90B1 low borderline
codonopsis_lanceolata_Cl_chr07_34570T Steroid DWF4/CYP90B1 medium borderline
codonopsis_lanceolata_Cl_chr08_03720T Steroid DWF4/CYP90B1 low borderline
codonopsis_lanceolata_Cl_chr08_03730T Steroid DWF4/CYP90B1 low borderline
codonopsis_lanceolata_Cl_chr08_12690T Steroid DWF4/CYP90B1 low borderline
codonopsis_lanceolata_Cl_chr08_23470T Steroid DWF4/CYP90B1 low borderline
codonopsis_lanceolata_Cl_chr08_26010T Steroid DWF4/CYP90B1 low borderline
codonopsis_lanceolata_Cl_chr08_32300T Steroid DWF4/CYP90B1 medium borderline
codonopsis_lanceolata_Cl_chr08_39220T Steroid DWF4/CYP90B1 low borderline
codonopsis_lanceolata_Cl_chr02_01780T Steroid DWF5 medium borderline
codonopsis_lanceolata_Cl_chr01_34090T Steroid DWF7 medium pass
codonopsis_lanceolata_Cl_chr03_21480T Steroid DWF7 medium pass
codonopsis_lanceolata_Cl_chr01_05340T Steroid FK low borderline
codonopsis_lanceolata_Cl_chr04_06700T Steroid FK medium pass
codonopsis_lanceolata_Cl_chr04_14220T Steroid HYD1 high pass
codonopsis_lanceolata_Cl_chr01_59640T Steroid ROT3/CYP90C1 medium borderline
codonopsis_lanceolata_Cl_chr02_13710T Steroid ROT3/CYP90C1 medium borderline
codonopsis_lanceolata_Cl_chr02_48040T Steroid ROT3/CYP90C1 low borderline
codonopsis_lanceolata_Cl_chr02_62880T Steroid ROT3/CYP90C1 medium borderline
codonopsis_lanceolata_Cl_chr03_04280T Steroid ROT3/CYP90C1 medium borderline
codonopsis_lanceolata_Cl_chr03_06310T Steroid ROT3/CYP90C1 low borderline
codonopsis_lanceolata_Cl_chr03_06320T Steroid ROT3/CYP90C1 low borderline
codonopsis_lanceolata_Cl_chr03_23400T Steroid ROT3/CYP90C1 low borderline
codonopsis_lanceolata_Cl_chr03_27710T Steroid ROT3/CYP90C1 low borderline
codonopsis_lanceolata_Cl_chr03_29450T Steroid ROT3/CYP90C1 medium borderline
codonopsis_lanceolata_Cl_chr03_43150T Steroid ROT3/CYP90C1 low borderline
codonopsis_lanceolata_Cl_chr04_32880T Steroid ROT3/CYP90C1 low borderline