PlantSME Plant secondary metabolism enzyme database

Codonopsis lanceolata (codonopsis_lanceolata)

Imported from atlas release summary for Codonopsis lanceolata.

2890
Candidate Protein Records
2489
Pathway-Level Records
6249
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 715 20 UGT (226) View species results
Alkaloid pathway 594 24 7DLGT (98) View species results
Phenylpropanoid pathway 439 12 POD (165) View species results
Flavonoid pathway 303 11 UFGT (197) View species results
Rosmarinic acid pathway 241 7 C4H (105) View species results
Steroid pathway 197 15 CAS (137) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 2584 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 329 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Protein/Isoform Record Pathway Family Confidence Status
codonopsis_lanceolata_Cl_chr04_36610T Steroid ROT3/CYP90C1 low borderline
codonopsis_lanceolata_Cl_chr05_17810T Steroid ROT3/CYP90C1 low borderline
codonopsis_lanceolata_Cl_chr06_29340T Steroid ROT3/CYP90C1 medium borderline
codonopsis_lanceolata_Cl_chr06_30840T Steroid ROT3/CYP90C1 medium borderline
codonopsis_lanceolata_Cl_chr07_41020T Steroid ROT3/CYP90C1 medium borderline
codonopsis_lanceolata_Cl_chr08_23440T Steroid ROT3/CYP90C1 medium borderline
codonopsis_lanceolata_Cl_chr02_41670T Steroid SMO1/SMO2 medium pass
codonopsis_lanceolata_Cl_chr05_06320T Steroid SMO1/SMO2 medium pass
codonopsis_lanceolata_Cl_chr06_27510T Steroid SMO1/SMO2 medium pass
codonopsis_lanceolata_Cl_chr07_01090T Steroid SMO1/SMO2 medium pass
codonopsis_lanceolata_Cl_C05134_unscaffolded_00030T Steroid SMT1/SMT2/SMT3 low borderline
codonopsis_lanceolata_Cl_C20694_unscaffolded_00010T Steroid SMT1/SMT2/SMT3 low borderline
codonopsis_lanceolata_Cl_C21481_unscaffolded_00020T Steroid SMT1/SMT2/SMT3 low borderline
codonopsis_lanceolata_Cl_chr01_12680T Steroid SMT1/SMT2/SMT3 medium pass
codonopsis_lanceolata_Cl_chr01_16010T Steroid SMT1/SMT2/SMT3 low borderline
codonopsis_lanceolata_Cl_chr01_25780T Steroid SMT1/SMT2/SMT3 low borderline
codonopsis_lanceolata_Cl_chr01_51690T Steroid SMT1/SMT2/SMT3 low borderline
codonopsis_lanceolata_Cl_chr01_51760T Steroid SMT1/SMT2/SMT3 low borderline
codonopsis_lanceolata_Cl_chr01_58810T Steroid SMT1/SMT2/SMT3 medium pass
codonopsis_lanceolata_Cl_chr01_62640T Steroid SMT1/SMT2/SMT3 medium pass
codonopsis_lanceolata_Cl_chr02_09690T Steroid SMT1/SMT2/SMT3 low borderline
codonopsis_lanceolata_Cl_chr02_19920T Steroid SMT1/SMT2/SMT3 medium pass
codonopsis_lanceolata_Cl_chr02_55660T Steroid SMT1/SMT2/SMT3 medium pass
codonopsis_lanceolata_Cl_chr02_58590T Steroid SMT1/SMT2/SMT3 low borderline
codonopsis_lanceolata_Cl_chr02_60090T Steroid SMT1/SMT2/SMT3 low borderline
codonopsis_lanceolata_Cl_chr02_66420T Steroid SMT1/SMT2/SMT3 medium pass
codonopsis_lanceolata_Cl_chr03_39330T Steroid SMT1/SMT2/SMT3 medium pass
codonopsis_lanceolata_Cl_chr03_45490T Steroid SMT1/SMT2/SMT3 medium pass
codonopsis_lanceolata_Cl_chr04_05030T Steroid SMT1/SMT2/SMT3 low borderline
codonopsis_lanceolata_Cl_chr04_05070T Steroid SMT1/SMT2/SMT3 low borderline
codonopsis_lanceolata_Cl_chr04_15800T Steroid SMT1/SMT2/SMT3 medium pass
codonopsis_lanceolata_Cl_chr04_15820T Steroid SMT1/SMT2/SMT3 medium pass
codonopsis_lanceolata_Cl_chr05_15370T Steroid SMT1/SMT2/SMT3 low borderline
codonopsis_lanceolata_Cl_chr05_36550T Steroid SMT1/SMT2/SMT3 medium pass
codonopsis_lanceolata_Cl_chr05_36580T Steroid SMT1/SMT2/SMT3 low borderline
codonopsis_lanceolata_Cl_chr05_36590T Steroid SMT1/SMT2/SMT3 low borderline
codonopsis_lanceolata_Cl_chr05_36600T Steroid SMT1/SMT2/SMT3 medium pass
codonopsis_lanceolata_Cl_chr06_00900T Steroid SMT1/SMT2/SMT3 low borderline
codonopsis_lanceolata_Cl_chr06_13750T Steroid SMT1/SMT2/SMT3 low borderline
codonopsis_lanceolata_Cl_chr06_15490T Steroid SMT1/SMT2/SMT3 medium pass
codonopsis_lanceolata_Cl_chr06_15500T Steroid SMT1/SMT2/SMT3 medium pass
codonopsis_lanceolata_Cl_chr06_32570T Steroid SMT1/SMT2/SMT3 medium pass
codonopsis_lanceolata_Cl_chr06_43000T Steroid SMT1/SMT2/SMT3 medium pass
codonopsis_lanceolata_Cl_chr06_43010T Steroid SMT1/SMT2/SMT3 medium pass
codonopsis_lanceolata_Cl_chr07_16600T Steroid SMT1/SMT2/SMT3 medium pass
codonopsis_lanceolata_Cl_chr07_16660T Steroid SMT1/SMT2/SMT3 low borderline
codonopsis_lanceolata_Cl_chr07_16670T Steroid SMT1/SMT2/SMT3 medium pass
codonopsis_lanceolata_Cl_chr07_20950T Steroid SMT1/SMT2/SMT3 low borderline
codonopsis_lanceolata_Cl_chr07_21090T Steroid SMT1/SMT2/SMT3 medium pass
codonopsis_lanceolata_Cl_chr07_28490T Steroid SMT1/SMT2/SMT3 medium pass