PlantSME Plant secondary metabolism enzyme database

Codonopsis lanceolata (codonopsis_lanceolata)

Imported from atlas release summary for Codonopsis lanceolata.

2890
Candidate Protein Records
2489
Pathway-Level Records
6249
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 715 20 UGT (226) View species results
Alkaloid pathway 594 24 7DLGT (98) View species results
Phenylpropanoid pathway 439 12 POD (165) View species results
Flavonoid pathway 303 11 UFGT (197) View species results
Rosmarinic acid pathway 241 7 C4H (105) View species results
Steroid pathway 197 15 CAS (137) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 2584 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 329 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
Reset
Protein/Isoform Record Pathway Family Confidence Status
codonopsis_lanceolata_Cl_chr07_28500T Steroid SMT1/SMT2/SMT3 medium pass
codonopsis_lanceolata_Cl_chr07_31570T Steroid SMT1/SMT2/SMT3 low borderline
codonopsis_lanceolata_Cl_chr07_33280T Steroid SMT1/SMT2/SMT3 medium pass
codonopsis_lanceolata_Cl_chr07_36330T Steroid SMT1/SMT2/SMT3 medium pass
codonopsis_lanceolata_Cl_chr07_36570T Steroid SMT1/SMT2/SMT3 medium pass
codonopsis_lanceolata_Cl_chr07_40130T Steroid SMT1/SMT2/SMT3 low borderline
codonopsis_lanceolata_Cl_chr08_13570T Steroid SMT1/SMT2/SMT3 medium pass
codonopsis_lanceolata_Cl_chr08_13620T Steroid SMT1/SMT2/SMT3 medium pass
codonopsis_lanceolata_Cl_chr08_20090T Steroid SMT1/SMT2/SMT3 medium pass
codonopsis_lanceolata_Cl_chr02_19690T Steroid SQE medium pass
codonopsis_lanceolata_Cl_chr02_19700T Steroid SQE medium pass
codonopsis_lanceolata_Cl_chr03_23720T Steroid SQE medium pass
codonopsis_lanceolata_Cl_chr03_23730T Steroid SQE medium pass
codonopsis_lanceolata_Cl_chr03_49060T Steroid SQE medium pass
codonopsis_lanceolata_Cl_chr04_00090T Steroid SQE medium pass
codonopsis_lanceolata_Cl_chr04_00100T Steroid SQE medium pass
codonopsis_lanceolata_Cl_chr05_14380T Steroid SQE low borderline
codonopsis_lanceolata_Cl_chr05_28360T Steroid SQE medium pass
codonopsis_lanceolata_Cl_chr02_62810T Steroid SQS/FDFT1 low borderline
codonopsis_lanceolata_Cl_chr03_19950T Steroid SQS/FDFT1 medium pass
codonopsis_lanceolata_Cl_chr04_07000T Steroid SQS/FDFT1 low borderline
codonopsis_lanceolata_Cl_chr05_13990T Steroid SQS/FDFT1 high pass
codonopsis_lanceolata_Cl_chr05_14040T Steroid SQS/FDFT1 high pass
codonopsis_lanceolata_Cl_chr07_01260T Steroid SQS/FDFT1 medium pass
codonopsis_lanceolata_Cl_chr07_01280T Steroid SQS/FDFT1 low borderline
codonopsis_lanceolata_Cl_chr08_32770T Steroid SQS/FDFT1 medium pass