PlantSME Plant secondary metabolism enzyme database

Codonopsis lanceolata (codonopsis_lanceolata)

Imported from atlas release summary for Codonopsis lanceolata.

2890
Candidate Protein Records
2489
Pathway-Level Records
6249
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 715 20 UGT (226) View species results
Alkaloid pathway 594 24 7DLGT (98) View species results
Phenylpropanoid pathway 439 12 POD (165) View species results
Flavonoid pathway 303 11 UFGT (197) View species results
Rosmarinic acid pathway 241 7 C4H (105) View species results
Steroid pathway 197 15 CAS (137) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 2584 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 329 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
codonopsis_lanceolata_Cl_chr06_21000T Flavonoid F3'H/CYP75B medium borderline
codonopsis_lanceolata_Cl_chr06_36860T Flavonoid F3'H/CYP75B low borderline
codonopsis_lanceolata_Cl_chr07_04890T Flavonoid F3'H/CYP75B medium borderline
codonopsis_lanceolata_Cl_chr07_04910T Flavonoid F3'H/CYP75B medium borderline
codonopsis_lanceolata_Cl_chr07_04930T Flavonoid F3'H/CYP75B medium borderline
codonopsis_lanceolata_Cl_chr07_05090T Flavonoid F3'H/CYP75B medium borderline
codonopsis_lanceolata_Cl_chr07_05200T Flavonoid F3'H/CYP75B low borderline
codonopsis_lanceolata_Cl_chr07_07480T Flavonoid F3'H/CYP75B medium borderline
codonopsis_lanceolata_Cl_chr07_14310T Flavonoid F3'H/CYP75B medium borderline
codonopsis_lanceolata_Cl_chr07_14320T Flavonoid F3'H/CYP75B medium borderline
codonopsis_lanceolata_Cl_chr07_14490T Flavonoid F3'H/CYP75B medium borderline
codonopsis_lanceolata_Cl_chr07_17810T Flavonoid F3'H/CYP75B medium borderline
codonopsis_lanceolata_Cl_chr07_22240T Flavonoid F3'H/CYP75B low borderline
codonopsis_lanceolata_Cl_chr07_25980T Flavonoid F3'H/CYP75B low borderline
codonopsis_lanceolata_Cl_chr07_29830T Flavonoid F3'H/CYP75B low borderline
codonopsis_lanceolata_Cl_chr07_34560T Flavonoid F3'H/CYP75B medium borderline
codonopsis_lanceolata_Cl_chr07_35810T Flavonoid F3'H/CYP75B medium borderline
codonopsis_lanceolata_Cl_chr07_36720T Flavonoid F3'H/CYP75B medium borderline
codonopsis_lanceolata_Cl_chr07_39210T Flavonoid F3'H/CYP75B low borderline
codonopsis_lanceolata_Cl_chr08_00190T Flavonoid F3'H/CYP75B medium borderline
codonopsis_lanceolata_Cl_chr08_00230T Flavonoid F3'H/CYP75B medium borderline
codonopsis_lanceolata_Cl_chr08_23900T Flavonoid F3'H/CYP75B medium borderline
codonopsis_lanceolata_Cl_chr08_36330T Flavonoid F3'H/CYP75B low borderline
codonopsis_lanceolata_Cl_chr08_39220T Flavonoid F3'H/CYP75B medium borderline
codonopsis_lanceolata_Cl_C00004_unscaffolded_00500T Flavonoid F3H low borderline
codonopsis_lanceolata_Cl_C00173_unscaffolded_00080T Flavonoid F3H medium borderline
codonopsis_lanceolata_Cl_C10026_unscaffolded_00040T Flavonoid F3H medium borderline
codonopsis_lanceolata_Cl_C15822_unscaffolded_00010T Flavonoid F3H low borderline
codonopsis_lanceolata_Cl_C15852_unscaffolded_00030T Flavonoid F3H medium borderline
codonopsis_lanceolata_Cl_C16786_unscaffolded_00010T Flavonoid F3H medium borderline
codonopsis_lanceolata_Cl_C16924_unscaffolded_00010T Flavonoid F3H medium borderline
codonopsis_lanceolata_Cl_C18299_unscaffolded_00010T Flavonoid F3H medium borderline
codonopsis_lanceolata_Cl_C21114_unscaffolded_00010T Flavonoid F3H medium borderline
codonopsis_lanceolata_Cl_chr01_05310T Flavonoid F3H medium borderline
codonopsis_lanceolata_Cl_chr01_06160T Flavonoid F3H medium borderline
codonopsis_lanceolata_Cl_chr01_16030T Flavonoid F3H medium borderline
codonopsis_lanceolata_Cl_chr01_16700T Flavonoid F3H low borderline
codonopsis_lanceolata_Cl_chr01_31850T Flavonoid F3H medium borderline
codonopsis_lanceolata_Cl_chr01_34180T Flavonoid F3H medium borderline
codonopsis_lanceolata_Cl_chr01_36780T Flavonoid F3H medium borderline
codonopsis_lanceolata_Cl_chr01_41170T Flavonoid F3H medium borderline
codonopsis_lanceolata_Cl_chr01_42940T Flavonoid F3H low borderline
codonopsis_lanceolata_Cl_chr01_44650T Flavonoid F3H medium borderline
codonopsis_lanceolata_Cl_chr01_44820T Flavonoid F3H low borderline
codonopsis_lanceolata_Cl_chr01_45210T Flavonoid F3H medium borderline
codonopsis_lanceolata_Cl_chr01_48270T Flavonoid F3H medium borderline
codonopsis_lanceolata_Cl_chr01_48580T Flavonoid F3H low borderline
codonopsis_lanceolata_Cl_chr01_51730T Flavonoid F3H medium borderline
codonopsis_lanceolata_Cl_chr01_62290T Flavonoid F3H medium borderline
codonopsis_lanceolata_Cl_chr02_02690T Flavonoid F3H medium pass