PlantSME Plant secondary metabolism enzyme database

Codonopsis lanceolata (codonopsis_lanceolata)

Imported from atlas release summary for Codonopsis lanceolata.

2890
Candidate Protein Records
2489
Pathway-Level Records
6249
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 715 20 UGT (226) View species results
Alkaloid pathway 594 24 7DLGT (98) View species results
Phenylpropanoid pathway 439 12 POD (165) View species results
Flavonoid pathway 303 11 UFGT (197) View species results
Rosmarinic acid pathway 241 7 C4H (105) View species results
Steroid pathway 197 15 CAS (137) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 23 2584 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 329 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
Reset
Protein/Isoform Record Pathway Family Confidence Status
codonopsis_lanceolata_Cl_chr02_04360T Flavonoid F3H medium borderline
codonopsis_lanceolata_Cl_chr02_05230T Flavonoid F3H low borderline
codonopsis_lanceolata_Cl_chr02_05260T Flavonoid F3H low borderline
codonopsis_lanceolata_Cl_chr02_05270T Flavonoid F3H low borderline
codonopsis_lanceolata_Cl_chr02_05280T Flavonoid F3H medium borderline
codonopsis_lanceolata_Cl_chr02_11560T Flavonoid F3H low borderline
codonopsis_lanceolata_Cl_chr02_24660T Flavonoid F3H medium borderline
codonopsis_lanceolata_Cl_chr02_24670T Flavonoid F3H low borderline
codonopsis_lanceolata_Cl_chr02_27330T Flavonoid F3H medium borderline
codonopsis_lanceolata_Cl_chr02_37940T Flavonoid F3H medium borderline
codonopsis_lanceolata_Cl_chr02_37950T Flavonoid F3H medium borderline
codonopsis_lanceolata_Cl_chr02_38660T Flavonoid F3H medium borderline
codonopsis_lanceolata_Cl_chr02_38670T Flavonoid F3H medium borderline
codonopsis_lanceolata_Cl_chr02_38720T Flavonoid F3H medium borderline
codonopsis_lanceolata_Cl_chr02_39070T Flavonoid F3H medium borderline
codonopsis_lanceolata_Cl_chr02_42290T Flavonoid F3H medium borderline
codonopsis_lanceolata_Cl_chr02_42410T Flavonoid F3H medium borderline
codonopsis_lanceolata_Cl_chr02_46310T Flavonoid F3H low borderline
codonopsis_lanceolata_Cl_chr02_46320T Flavonoid F3H low borderline
codonopsis_lanceolata_Cl_chr02_46440T Flavonoid F3H medium borderline
codonopsis_lanceolata_Cl_chr02_46480T Flavonoid F3H medium borderline
codonopsis_lanceolata_Cl_chr02_51010T Flavonoid F3H low borderline
codonopsis_lanceolata_Cl_chr02_51340T Flavonoid F3H medium borderline
codonopsis_lanceolata_Cl_chr02_55440T Flavonoid F3H medium borderline
codonopsis_lanceolata_Cl_chr02_56410T Flavonoid F3H medium borderline
codonopsis_lanceolata_Cl_chr02_59490T Flavonoid F3H low borderline
codonopsis_lanceolata_Cl_chr03_05140T Flavonoid F3H medium borderline
codonopsis_lanceolata_Cl_chr03_06140T Flavonoid F3H medium borderline
codonopsis_lanceolata_Cl_chr03_09200T Flavonoid F3H low borderline
codonopsis_lanceolata_Cl_chr03_12020T Flavonoid F3H medium borderline
codonopsis_lanceolata_Cl_chr03_17360T Flavonoid F3H medium borderline
codonopsis_lanceolata_Cl_chr03_19540T Flavonoid F3H low borderline
codonopsis_lanceolata_Cl_chr03_23610T Flavonoid F3H medium borderline
codonopsis_lanceolata_Cl_chr03_33650T Flavonoid F3H low borderline
codonopsis_lanceolata_Cl_chr03_41350T Flavonoid F3H medium borderline
codonopsis_lanceolata_Cl_chr03_44200T Flavonoid F3H medium pass
codonopsis_lanceolata_Cl_chr03_48870T Flavonoid F3H medium borderline
codonopsis_lanceolata_Cl_chr03_49840T Flavonoid F3H medium borderline
codonopsis_lanceolata_Cl_chr03_56750T Flavonoid F3H medium borderline
codonopsis_lanceolata_Cl_chr04_04290T Flavonoid F3H medium borderline
codonopsis_lanceolata_Cl_chr04_08130T Flavonoid F3H medium borderline
codonopsis_lanceolata_Cl_chr04_08630T Flavonoid F3H medium borderline
codonopsis_lanceolata_Cl_chr04_08830T Flavonoid F3H medium borderline
codonopsis_lanceolata_Cl_chr04_11400T Flavonoid F3H medium borderline
codonopsis_lanceolata_Cl_chr04_15350T Flavonoid F3H medium borderline
codonopsis_lanceolata_Cl_chr04_15360T Flavonoid F3H medium borderline
codonopsis_lanceolata_Cl_chr04_17860T Flavonoid F3H medium borderline
codonopsis_lanceolata_Cl_chr04_17870T Flavonoid F3H medium borderline
codonopsis_lanceolata_Cl_chr04_18180T Flavonoid F3H medium borderline
codonopsis_lanceolata_Cl_chr04_23700T Flavonoid F3H low borderline