PlantSME Plant secondary metabolism enzyme database

Gossypium barbadense (gossypium_barbadense)

Imported from atlas release summary for Gossypium barbadense.

4400
Candidate Protein Records
3645
Pathway-Level Records
9305
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1055 21 BAHD (388) View species results
Alkaloid pathway 824 25 7DLGT (140) View species results
Phenylpropanoid pathway 824 12 POD (325) View species results
Flavonoid pathway 411 13 UFGT (256) View species results
Rosmarinic acid pathway 307 7 C4H (123) View species results
Steroid pathway 224 12 CAS (104) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 3759 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 675 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: 7DLH
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Protein/Isoform Record Pathway Family Confidence Status
GbarD02G0002810 Alkaloid 7DLH medium borderline
GbarD03G0013370 Alkaloid 7DLH medium borderline
GbarD04G0011280 Alkaloid 7DLH medium borderline
GbarD04G0020940 Alkaloid 7DLH medium borderline
GbarD04G0020950 Alkaloid 7DLH medium borderline
GbarD05G0006430 Alkaloid 7DLH medium borderline
GbarD05G0019930 Alkaloid 7DLH medium borderline
GbarD05G0032320 Alkaloid 7DLH low borderline
GbarD07G0011100 Alkaloid 7DLH medium borderline
GbarD07G0020050 Alkaloid 7DLH medium borderline
GbarD07G0020690 Alkaloid 7DLH medium borderline
GbarD08G0015980 Alkaloid 7DLH medium borderline
GbarD08G0021130 Alkaloid 7DLH medium borderline
GbarD08G0026590 Alkaloid 7DLH medium borderline
GbarD09G0019120 Alkaloid 7DLH medium borderline
GbarD10G0015390 Alkaloid 7DLH medium borderline
GbarD10G0018030 Alkaloid 7DLH low borderline
GbarD11G0017390 Alkaloid 7DLH medium borderline
GbarD11G0023990 Alkaloid 7DLH medium borderline
GbarD11G0037160 Alkaloid 7DLH medium borderline
GbarD12G0005490 Alkaloid 7DLH medium borderline
GbarD12G0011440 Alkaloid 7DLH medium borderline
GbarD12G0025040 Alkaloid 7DLH medium borderline
GbarD12G0027970 Alkaloid 7DLH medium borderline
GbarD13G0003690 Alkaloid 7DLH medium borderline
GbarD13G0003700 Alkaloid 7DLH medium borderline
GbarD13G0003730 Alkaloid 7DLH medium borderline
GbarD13G0006340 Alkaloid 7DLH low borderline
GbarD13G0006490 Alkaloid 7DLH medium borderline
GbarD13G0008810 Alkaloid 7DLH medium borderline
GbarD13G0008820 Alkaloid 7DLH medium borderline
GbarD13G0008840 Alkaloid 7DLH medium borderline