PlantSME Plant secondary metabolism enzyme database

Gossypium barbadense (gossypium_barbadense)

Imported from atlas release summary for Gossypium barbadense.

4400
Candidate Protein Records
3645
Pathway-Level Records
9305
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1055 21 BAHD (388) View species results
Alkaloid pathway 824 25 7DLGT (140) View species results
Phenylpropanoid pathway 824 12 POD (325) View species results
Flavonoid pathway 411 13 UFGT (256) View species results
Rosmarinic acid pathway 307 7 C4H (123) View species results
Steroid pathway 224 12 CAS (104) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 3759 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 675 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: HCT
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Protein/Isoform Record Pathway Family Confidence Status
GbarA01G0010350 Phenylpropanoid HCT low borderline
GbarA03G0003450 Phenylpropanoid HCT low borderline
GbarA03G0006640 Phenylpropanoid HCT medium pass
GbarA03G0015040 Phenylpropanoid HCT low borderline
GbarA03G0015060 Phenylpropanoid HCT low borderline
GbarA03G0020000 Phenylpropanoid HCT low borderline
GbarA04G0010810 Phenylpropanoid HCT low borderline
GbarA04G0012400 Phenylpropanoid HCT low borderline
GbarA04G0016690 Phenylpropanoid HCT low borderline
GbarA05G0005620 Phenylpropanoid HCT medium pass
GbarA05G0011720 Phenylpropanoid HCT low borderline
GbarA05G0011730 Phenylpropanoid HCT low borderline
GbarA05G0011870 Phenylpropanoid HCT medium pass
GbarA05G0018010 Phenylpropanoid HCT low borderline
GbarA05G0033160 Phenylpropanoid HCT low borderline
GbarA05G0034400 Phenylpropanoid HCT low borderline
GbarA05G0034640 Phenylpropanoid HCT medium pass
GbarA05G0035240 Phenylpropanoid HCT medium pass
GbarA06G0000700 Phenylpropanoid HCT low borderline
GbarA06G0006540 Phenylpropanoid HCT low borderline
GbarA06G0022080 Phenylpropanoid HCT medium pass
GbarA06G0022090 Phenylpropanoid HCT medium pass
GbarA06G0022170 Phenylpropanoid HCT medium pass
GbarA06G0022190 Phenylpropanoid HCT medium pass
GbarA07G0005500 Phenylpropanoid HCT medium pass
GbarA07G0010700 Phenylpropanoid HCT low borderline
GbarA07G0026250 Phenylpropanoid HCT low borderline
GbarA08G0026040 Phenylpropanoid HCT low borderline
GbarA10G0007070 Phenylpropanoid HCT medium pass
GbarA10G0015830 Phenylpropanoid HCT medium pass
GbarA10G0015960 Phenylpropanoid HCT medium pass
GbarA10G0025800 Phenylpropanoid HCT low borderline
GbarA10G0026480 Phenylpropanoid HCT low borderline
GbarA11G0010850 Phenylpropanoid HCT medium pass
GbarA11G0020350 Phenylpropanoid HCT medium pass
GbarA12G0016670 Phenylpropanoid HCT low borderline
GbarA13G0001490 Phenylpropanoid HCT low borderline
GbarA13G0012450 Phenylpropanoid HCT low borderline
GbarA13G0012460 Phenylpropanoid HCT medium pass
GbarA13G0018570 Phenylpropanoid HCT low borderline
GbarA13G0018580 Phenylpropanoid HCT low borderline
GbarA13G0018590 Phenylpropanoid HCT low borderline
GbarA13G0020970 Phenylpropanoid HCT low borderline
GbarD02G0016790 Phenylpropanoid HCT low borderline
GbarD02G0016810 Phenylpropanoid HCT low borderline
GbarD02G0021700 Phenylpropanoid HCT low borderline
GbarD03G0016280 Phenylpropanoid HCT low borderline
GbarD04G0006970 Phenylpropanoid HCT low borderline
GbarD04G0007220 Phenylpropanoid HCT low borderline
GbarD04G0007720 Phenylpropanoid HCT medium pass