PlantSME Plant secondary metabolism enzyme database

Gossypium barbadense (gossypium_barbadense)

Imported from atlas release summary for Gossypium barbadense.

4400
Candidate Protein Records
3645
Pathway-Level Records
9305
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1055 21 BAHD (388) View species results
Alkaloid pathway 824 25 7DLGT (140) View species results
Phenylpropanoid pathway 824 12 POD (325) View species results
Flavonoid pathway 411 13 UFGT (256) View species results
Rosmarinic acid pathway 307 7 C4H (123) View species results
Steroid pathway 224 12 CAS (104) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 3759 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 675 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: IFS
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Protein/Isoform Record Pathway Family Confidence Status
GbarD06G0001100 Flavonoid IFS low borderline
GbarD06G0001170 Flavonoid IFS medium borderline
GbarD06G0001190 Flavonoid IFS medium borderline
GbarD06G0001230 Flavonoid IFS medium borderline
GbarD06G0001240 Flavonoid IFS medium borderline
GbarD06G0001250 Flavonoid IFS medium borderline
GbarD06G0002110 Flavonoid IFS medium borderline
GbarD06G0008200 Flavonoid IFS medium borderline
GbarD06G0016130 Flavonoid IFS low borderline
GbarD06G0018550 Flavonoid IFS low borderline
GbarD06G0019160 Flavonoid IFS low borderline
GbarD06G0020740 Flavonoid IFS low borderline
GbarD07G0000310 Flavonoid IFS low borderline
GbarD07G0004620 Flavonoid IFS low borderline
GbarD07G0005790 Flavonoid IFS low borderline
GbarD07G0006230 Flavonoid IFS medium borderline
GbarD07G0006260 Flavonoid IFS medium borderline
GbarD07G0008650 Flavonoid IFS medium borderline
GbarD07G0008660 Flavonoid IFS medium borderline
GbarD07G0010760 Flavonoid IFS low borderline
GbarD07G0011100 Flavonoid IFS low borderline
GbarD07G0013020 Flavonoid IFS medium borderline
GbarD07G0022730 Flavonoid IFS medium borderline
GbarD08G0000860 Flavonoid IFS low borderline
GbarD08G0001940 Flavonoid IFS low borderline
GbarD08G0015610 Flavonoid IFS low borderline
GbarD08G0015980 Flavonoid IFS low borderline
GbarD08G0017670 Flavonoid IFS low borderline
GbarD08G0018590 Flavonoid IFS low borderline
GbarD08G0018600 Flavonoid IFS low borderline
GbarD08G0020310 Flavonoid IFS medium borderline
GbarD08G0020320 Flavonoid IFS medium borderline
GbarD08G0021130 Flavonoid IFS low borderline
GbarD09G0003350 Flavonoid IFS low borderline
GbarD09G0003360 Flavonoid IFS low borderline
GbarD09G0005800 Flavonoid IFS medium borderline
GbarD09G0005810 Flavonoid IFS medium borderline
GbarD09G0005820 Flavonoid IFS medium borderline
GbarD09G0005840 Flavonoid IFS medium borderline
GbarD09G0010740 Flavonoid IFS low borderline
GbarD09G0013700 Flavonoid IFS medium borderline
GbarD09G0013710 Flavonoid IFS medium borderline
GbarD09G0015150 Flavonoid IFS low borderline
GbarD09G0015380 Flavonoid IFS medium borderline
GbarD09G0020350 Flavonoid IFS medium borderline
GbarD09G0020360 Flavonoid IFS medium borderline
GbarD09G0020370 Flavonoid IFS low borderline
GbarD09G0020860 Flavonoid IFS low borderline
GbarD09G0020950 Flavonoid IFS medium borderline
GbarD09G0021650 Flavonoid IFS medium borderline