PlantSME Plant secondary metabolism enzyme database

Gossypium barbadense (gossypium_barbadense)

Imported from atlas release summary for Gossypium barbadense.

4400
Candidate Protein Records
3645
Pathway-Level Records
9305
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1055 21 BAHD (388) View species results
Alkaloid pathway 824 25 7DLGT (140) View species results
Phenylpropanoid pathway 824 12 POD (325) View species results
Flavonoid pathway 411 13 UFGT (256) View species results
Rosmarinic acid pathway 307 7 C4H (123) View species results
Steroid pathway 224 12 CAS (104) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 3759 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 675 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: T3O
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Protein/Isoform Record Pathway Family Confidence Status
GbarA12G0024580 Alkaloid T3O medium pass
GbarA12G0025950 Alkaloid T3O medium borderline
GbarA12G0028450 Alkaloid T3O medium borderline
GbarA13G0000110 Alkaloid T3O medium borderline
GbarA13G0001260 Alkaloid T3O medium pass
GbarA13G0001700 Alkaloid T3O medium pass
GbarA13G0002330 Alkaloid T3O medium borderline
GbarA13G0002350 Alkaloid T3O medium borderline
GbarA13G0002370 Alkaloid T3O medium borderline
GbarA13G0002980 Alkaloid T3O medium borderline
GbarA13G0003970 Alkaloid T3O medium pass
GbarA13G0006250 Alkaloid T3O medium pass
GbarA13G0008610 Alkaloid T3O medium pass
GbarA13G0008670 Alkaloid T3O medium borderline
GbarA13G0013940 Alkaloid T3O medium pass
GbarA13G0014120 Alkaloid T3O medium pass
GbarA13G0014500 Alkaloid T3O medium borderline
GbarA13G0015660 Alkaloid T3O medium borderline
GbarA13G0015760 Alkaloid T3O medium borderline
GbarA13G0018190 Alkaloid T3O medium pass
GbarA13G0018240 Alkaloid T3O medium borderline
GbarA13G0022760 Alkaloid T3O medium borderline
GbarD01G0005040 Alkaloid T3O medium pass
GbarD01G0005060 Alkaloid T3O medium pass
GbarD01G0006170 Alkaloid T3O medium borderline
GbarD01G0007680 Alkaloid T3O medium pass
GbarD01G0008580 Alkaloid T3O medium borderline
GbarD01G0008590 Alkaloid T3O medium borderline
GbarD01G0008600 Alkaloid T3O medium borderline
GbarD01G0008610 Alkaloid T3O medium borderline
GbarD01G0008650 Alkaloid T3O medium borderline
GbarD01G0008710 Alkaloid T3O medium borderline
GbarD01G0012180 Alkaloid T3O medium borderline
GbarD01G0022110 Alkaloid T3O medium borderline
GbarD01G0022130 Alkaloid T3O medium borderline
GbarD01G0022330 Alkaloid T3O medium borderline
GbarD02G0000510 Alkaloid T3O medium borderline
GbarD02G0009120 Alkaloid T3O medium borderline
GbarD02G0009150 Alkaloid T3O medium borderline
GbarD02G0014210 Alkaloid T3O medium borderline
GbarD02G0017110 Alkaloid T3O low borderline
GbarD02G0017150 Alkaloid T3O medium borderline
GbarD02G0017160 Alkaloid T3O medium borderline
GbarD02G0023000 Alkaloid T3O medium pass
GbarD03G0001150 Alkaloid T3O medium pass
GbarD03G0002290 Alkaloid T3O medium borderline
GbarD03G0002320 Alkaloid T3O medium borderline
GbarD03G0002330 Alkaloid T3O medium borderline
GbarD03G0002610 Alkaloid T3O medium borderline
GbarD03G0004710 Alkaloid T3O medium borderline