PlantSME Plant secondary metabolism enzyme database

Gossypium barbadense (gossypium_barbadense)

Imported from atlas release summary for Gossypium barbadense.

4400
Candidate Protein Records
3645
Pathway-Level Records
9305
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1055 21 BAHD (388) View species results
Alkaloid pathway 824 25 7DLGT (140) View species results
Phenylpropanoid pathway 824 12 POD (325) View species results
Flavonoid pathway 411 13 UFGT (256) View species results
Rosmarinic acid pathway 307 7 C4H (123) View species results
Steroid pathway 224 12 CAS (104) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 3759 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 675 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
Reset
Protein/Isoform Record Pathway Family Confidence Status
GbarD04G0006120 Rosmarinic Acid C4H low borderline
GbarD04G0011690 Rosmarinic Acid C4H low borderline
GbarD04G0019090 Rosmarinic Acid C4H low borderline
GbarD04G0019100 Rosmarinic Acid C4H medium pass
GbarD04G0019140 Rosmarinic Acid C4H low borderline
GbarD04G0019220 Rosmarinic Acid C4H medium pass
GbarD04G0020310 Rosmarinic Acid C4H low borderline
GbarD04G0020940 Rosmarinic Acid C4H low borderline
GbarD04G0020950 Rosmarinic Acid C4H low borderline
GbarD05G0001960 Rosmarinic Acid C4H low borderline
GbarD05G0004210 Rosmarinic Acid C4H low borderline
GbarD05G0006430 Rosmarinic Acid C4H low borderline
GbarD05G0006910 Rosmarinic Acid C4H medium pass
GbarD05G0009670 Rosmarinic Acid C4H low borderline
GbarD05G0010990 Rosmarinic Acid C4H low borderline
GbarD05G0013680 Rosmarinic Acid C4H low borderline
GbarD05G0015230 Rosmarinic Acid C4H low borderline
GbarD05G0019160 Rosmarinic Acid C4H medium pass
GbarD05G0019930 Rosmarinic Acid C4H low borderline
GbarD05G0020150 Rosmarinic Acid C4H low borderline
GbarD05G0020160 Rosmarinic Acid C4H low borderline
GbarD05G0020170 Rosmarinic Acid C4H low borderline
GbarD05G0020180 Rosmarinic Acid C4H low borderline
GbarD05G0020190 Rosmarinic Acid C4H low borderline
GbarD05G0020240 Rosmarinic Acid C4H medium pass
GbarD05G0020630 Rosmarinic Acid C4H low borderline
GbarD05G0021080 Rosmarinic Acid C4H low borderline
GbarD05G0021130 Rosmarinic Acid C4H low borderline
GbarD05G0026410 Rosmarinic Acid C4H medium pass
GbarD05G0026620 Rosmarinic Acid C4H low borderline
GbarD05G0029810 Rosmarinic Acid C4H medium pass
GbarD05G0032160 Rosmarinic Acid C4H low borderline
GbarD05G0035290 Rosmarinic Acid C4H medium pass
GbarD05G0035310 Rosmarinic Acid C4H medium pass
GbarD05G0038700 Rosmarinic Acid C4H low borderline
GbarD05G0038710 Rosmarinic Acid C4H low borderline
GbarD05G0038720 Rosmarinic Acid C4H low borderline
GbarD05G0038740 Rosmarinic Acid C4H low borderline
GbarD06G0000610 Rosmarinic Acid C4H low borderline
GbarD06G0001160 Rosmarinic Acid C4H low borderline
GbarD06G0001170 Rosmarinic Acid C4H low borderline
GbarD06G0001180 Rosmarinic Acid C4H low borderline
GbarD06G0001190 Rosmarinic Acid C4H low borderline
GbarD06G0001210 Rosmarinic Acid C4H low borderline
GbarD06G0001220 Rosmarinic Acid C4H low borderline
GbarD06G0001230 Rosmarinic Acid C4H low borderline
GbarD06G0001240 Rosmarinic Acid C4H low borderline
GbarD06G0001250 Rosmarinic Acid C4H low borderline
GbarD06G0001310 Rosmarinic Acid C4H low borderline
GbarD06G0002110 Rosmarinic Acid C4H medium pass