PlantSME Plant secondary metabolism enzyme database

Gossypium barbadense (gossypium_barbadense)

Imported from atlas release summary for Gossypium barbadense.

4400
Candidate Protein Records
3645
Pathway-Level Records
9305
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1055 21 BAHD (388) View species results
Alkaloid pathway 824 25 7DLGT (140) View species results
Phenylpropanoid pathway 824 12 POD (325) View species results
Flavonoid pathway 411 13 UFGT (256) View species results
Rosmarinic acid pathway 307 7 C4H (123) View species results
Steroid pathway 224 12 CAS (104) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 3759 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 675 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Protein/Isoform Record Pathway Family Confidence Status
GbarD06G0006000 Rosmarinic Acid C4H low borderline
GbarD06G0008200 Rosmarinic Acid C4H low borderline
GbarD06G0012530 Rosmarinic Acid C4H low borderline
GbarD06G0016130 Rosmarinic Acid C4H low borderline
GbarD06G0017400 Rosmarinic Acid C4H low borderline
GbarD06G0018550 Rosmarinic Acid C4H low borderline
GbarD06G0019160 Rosmarinic Acid C4H low borderline
GbarD06G0020740 Rosmarinic Acid C4H low borderline
GbarD06G0021040 Rosmarinic Acid C4H low borderline
GbarD06G0023690 Rosmarinic Acid C4H low borderline
GbarD07G0000310 Rosmarinic Acid C4H low borderline
GbarD07G0004620 Rosmarinic Acid C4H low borderline
GbarD07G0006230 Rosmarinic Acid C4H low borderline
GbarD07G0006260 Rosmarinic Acid C4H low borderline
GbarD07G0008650 Rosmarinic Acid C4H medium pass
GbarD07G0008660 Rosmarinic Acid C4H low borderline
GbarD07G0008790 Rosmarinic Acid C4H low borderline
GbarD07G0010050 Rosmarinic Acid C4H low borderline
GbarD07G0010070 Rosmarinic Acid C4H low borderline
GbarD07G0010080 Rosmarinic Acid C4H low borderline
GbarD07G0010760 Rosmarinic Acid C4H low borderline
GbarD07G0013020 Rosmarinic Acid C4H medium pass
GbarD07G0017260 Rosmarinic Acid C4H low borderline
GbarD07G0020050 Rosmarinic Acid C4H low borderline
GbarD07G0020400 Rosmarinic Acid C4H low borderline
GbarD07G0020680 Rosmarinic Acid C4H low borderline
GbarD07G0020690 Rosmarinic Acid C4H low borderline
GbarD07G0021260 Rosmarinic Acid C4H low borderline
GbarD07G0021280 Rosmarinic Acid C4H low borderline
GbarD07G0021290 Rosmarinic Acid C4H low borderline
GbarD07G0022730 Rosmarinic Acid C4H low borderline
GbarD08G0000860 Rosmarinic Acid C4H low borderline
GbarD08G0001940 Rosmarinic Acid C4H low borderline
GbarD08G0012750 Rosmarinic Acid C4H low borderline
GbarD08G0015100 Rosmarinic Acid C4H low borderline
GbarD08G0015610 Rosmarinic Acid C4H low borderline
GbarD08G0017670 Rosmarinic Acid C4H low borderline
GbarD08G0018600 Rosmarinic Acid C4H low borderline
GbarD08G0020050 Rosmarinic Acid C4H medium pass
GbarD08G0020300 Rosmarinic Acid C4H low borderline
GbarD08G0020310 Rosmarinic Acid C4H low borderline
GbarD08G0020320 Rosmarinic Acid C4H medium pass
GbarD08G0020330 Rosmarinic Acid C4H low borderline
GbarD08G0025150 Rosmarinic Acid C4H low borderline
GbarD08G0026590 Rosmarinic Acid C4H low borderline
GbarD08G0027260 Rosmarinic Acid C4H low borderline
GbarD09G0005800 Rosmarinic Acid C4H medium pass
GbarD09G0005810 Rosmarinic Acid C4H low borderline
GbarD09G0005820 Rosmarinic Acid C4H medium pass
GbarD09G0005830 Rosmarinic Acid C4H low borderline