PlantSME Plant secondary metabolism enzyme database

Gossypium barbadense (gossypium_barbadense)

Imported from atlas release summary for Gossypium barbadense.

4400
Candidate Protein Records
3645
Pathway-Level Records
9305
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1055 21 BAHD (388) View species results
Alkaloid pathway 824 25 7DLGT (140) View species results
Phenylpropanoid pathway 824 12 POD (325) View species results
Flavonoid pathway 411 13 UFGT (256) View species results
Rosmarinic acid pathway 307 7 C4H (123) View species results
Steroid pathway 224 12 CAS (104) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 3759 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 675 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Protein/Isoform Record Pathway Family Confidence Status
GbarD09G0005840 Rosmarinic Acid C4H medium pass
GbarD09G0010740 Rosmarinic Acid C4H low borderline
GbarD09G0013680 Rosmarinic Acid C4H medium pass
GbarD09G0013690 Rosmarinic Acid C4H low borderline
GbarD09G0013700 Rosmarinic Acid C4H low borderline
GbarD09G0013710 Rosmarinic Acid C4H medium pass
GbarD09G0015380 Rosmarinic Acid C4H medium pass
GbarD09G0019120 Rosmarinic Acid C4H low borderline
GbarD09G0020350 Rosmarinic Acid C4H low borderline
GbarD09G0020360 Rosmarinic Acid C4H low borderline
GbarD09G0020370 Rosmarinic Acid C4H low borderline
GbarD09G0020950 Rosmarinic Acid C4H low borderline
GbarD09G0021650 Rosmarinic Acid C4H medium pass
GbarD09G0021660 Rosmarinic Acid C4H medium pass
GbarD10G0001430 Rosmarinic Acid C4H low borderline
GbarD10G0001480 Rosmarinic Acid C4H low borderline
GbarD10G0005810 Rosmarinic Acid C4H medium pass
GbarD10G0005820 Rosmarinic Acid C4H low borderline
GbarD10G0009830 Rosmarinic Acid C4H medium pass
GbarD10G0015360 Rosmarinic Acid C4H low borderline
GbarD10G0015390 Rosmarinic Acid C4H low borderline
GbarD10G0020390 Rosmarinic Acid C4H medium pass
GbarD10G0020660 Rosmarinic Acid C4H low borderline
GbarD10G0022240 Rosmarinic Acid C4H low borderline
GbarD10G0022250 Rosmarinic Acid C4H low borderline
GbarD10G0022270 Rosmarinic Acid C4H low borderline
GbarD10G0022280 Rosmarinic Acid C4H low borderline
GbarD10G0022290 Rosmarinic Acid C4H low borderline
GbarD10G0022710 Rosmarinic Acid C4H low borderline
GbarD10G0022790 Rosmarinic Acid C4H low borderline
GbarD10G0022890 Rosmarinic Acid C4H medium pass
GbarD10G0022900 Rosmarinic Acid C4H medium pass
GbarD10G0022910 Rosmarinic Acid C4H medium pass
GbarD10G0022920 Rosmarinic Acid C4H medium pass
GbarD10G0024610 Rosmarinic Acid C4H low borderline
GbarD10G0025350 Rosmarinic Acid C4H medium pass
GbarD10G0026170 Rosmarinic Acid C4H low borderline
GbarD10G0026180 Rosmarinic Acid C4H low borderline
GbarD10G0026190 Rosmarinic Acid C4H medium pass
GbarD10G0027130 Rosmarinic Acid C4H low borderline
GbarD10G0027220 Rosmarinic Acid C4H low borderline
GbarD11G0000770 Rosmarinic Acid C4H low borderline
GbarD11G0000800 Rosmarinic Acid C4H low borderline
GbarD11G0003940 Rosmarinic Acid C4H medium pass
GbarD11G0003950 Rosmarinic Acid C4H low borderline
GbarD11G0004780 Rosmarinic Acid C4H medium pass
GbarD11G0008860 Rosmarinic Acid C4H low borderline
GbarD11G0008870 Rosmarinic Acid C4H low borderline
GbarD11G0008880 Rosmarinic Acid C4H low borderline
GbarD11G0010680 Rosmarinic Acid C4H low borderline