PlantSME Plant secondary metabolism enzyme database

Gossypium barbadense (gossypium_barbadense)

Imported from atlas release summary for Gossypium barbadense.

4400
Candidate Protein Records
3645
Pathway-Level Records
9305
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1055 21 BAHD (388) View species results
Alkaloid pathway 824 25 7DLGT (140) View species results
Phenylpropanoid pathway 824 12 POD (325) View species results
Flavonoid pathway 411 13 UFGT (256) View species results
Rosmarinic acid pathway 307 7 C4H (123) View species results
Steroid pathway 224 12 CAS (104) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 3759 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 675 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Protein/Isoform Record Pathway Family Confidence Status
GbarD02G0002720 Steroid CYP90D1 low borderline
GbarD02G0002770 Steroid CYP90D1 low borderline
GbarD02G0002790 Steroid CYP90D1 low borderline
GbarD02G0002800 Steroid CYP90D1 low borderline
GbarD02G0002810 Steroid CYP90D1 low borderline
GbarD02G0007060 Steroid CYP90D1 medium borderline
GbarD02G0007090 Steroid CYP90D1 medium borderline
GbarD04G0002040 Steroid CYP90D1 low borderline
GbarD04G0002050 Steroid CYP90D1 low borderline
GbarD04G0002250 Steroid CYP90D1 low borderline
GbarD04G0011690 Steroid CYP90D1 low borderline
GbarD04G0019090 Steroid CYP90D1 low borderline
GbarD04G0019100 Steroid CYP90D1 low borderline
GbarD04G0019140 Steroid CYP90D1 low borderline
GbarD04G0019220 Steroid CYP90D1 low borderline
GbarD04G0020940 Steroid CYP90D1 low borderline
GbarD04G0020950 Steroid CYP90D1 low borderline
GbarD05G0001960 Steroid CYP90D1 low borderline
GbarD05G0006430 Steroid CYP90D1 low borderline
GbarD05G0019920 Steroid CYP90D1 low borderline
GbarD05G0020190 Steroid CYP90D1 low borderline
GbarD05G0035290 Steroid CYP90D1 low borderline
GbarD06G0001160 Steroid CYP90D1 low borderline
GbarD06G0019160 Steroid CYP90D1 medium borderline
GbarD06G0021040 Steroid CYP90D1 medium borderline
GbarD07G0006230 Steroid CYP90D1 low borderline
GbarD07G0010050 Steroid CYP90D1 low borderline
GbarD07G0010070 Steroid CYP90D1 low borderline
GbarD07G0010080 Steroid CYP90D1 low borderline
GbarD07G0020690 Steroid CYP90D1 low borderline
GbarD08G0020310 Steroid CYP90D1 low borderline
GbarD08G0020320 Steroid CYP90D1 low borderline
GbarD08G0027260 Steroid CYP90D1 low borderline
GbarD09G0013680 Steroid CYP90D1 low borderline
GbarD09G0013710 Steroid CYP90D1 low borderline
GbarD10G0001430 Steroid CYP90D1 medium borderline
GbarD10G0005810 Steroid CYP90D1 low borderline
GbarD10G0027130 Steroid CYP90D1 medium borderline
GbarD11G0014380 Steroid CYP90D1 low borderline
GbarD11G0016470 Steroid CYP90D1 low borderline
GbarD11G0019570 Steroid CYP90D1 medium borderline
GbarD12G0004320 Steroid CYP90D1 low borderline
GbarD12G0011440 Steroid CYP90D1 low borderline
GbarD13G0003690 Steroid CYP90D1 low borderline
GbarD13G0003730 Steroid CYP90D1 low borderline
GbarD13G0008810 Steroid CYP90D1 low borderline
GbarD13G0008840 Steroid CYP90D1 low borderline
GbarD13G0009230 Steroid CYP90D1 low borderline
GbarD13G0013450 Steroid CYP90D1 medium borderline
GbarD13G0017740 Steroid CYP90D1 medium borderline