PlantSME Plant secondary metabolism enzyme database

Gossypium barbadense (gossypium_barbadense)

Imported from atlas release summary for Gossypium barbadense.

4400
Candidate Protein Records
3645
Pathway-Level Records
9305
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1055 21 BAHD (388) View species results
Alkaloid pathway 824 25 7DLGT (140) View species results
Phenylpropanoid pathway 824 12 POD (325) View species results
Flavonoid pathway 411 13 UFGT (256) View species results
Rosmarinic acid pathway 307 7 C4H (123) View species results
Steroid pathway 224 12 CAS (104) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 3759 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 675 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Protein/Isoform Record Pathway Family Confidence Status
GbarD13G0017800 Steroid CYP90D1 low borderline
Gbarscaffold1817_obj_A060001490 Steroid CYP90D1 low borderline
GbarA02G0019620 Steroid DET2 low borderline
GbarA04G0010740 Steroid DET2 medium pass
GbarA05G0036910 Steroid DET2 low borderline
GbarA10G0021310 Steroid DET2 low borderline
GbarA10G0021320 Steroid DET2 low borderline
GbarA10G0024180 Steroid DET2 low borderline
GbarD03G0001020 Steroid DET2 low borderline
GbarD10G0022450 Steroid DET2 low borderline
GbarD10G0022460 Steroid DET2 low borderline
GbarD10G0025170 Steroid DET2 low borderline
GbarD10G0027730 Steroid DET2 low borderline
GbarA03G0012880 Steroid DWF1 medium pass
GbarA03G0012890 Steroid DWF1 medium pass
GbarA05G0005210 Steroid DWF1 low borderline
GbarA13G0002590 Steroid DWF1 medium pass
GbarD13G0002560 Steroid DWF1 medium pass
GbarA01G0008450 Steroid DWF4/CYP90B1 low borderline
GbarA01G0021210 Steroid DWF4/CYP90B1 low borderline
GbarA01G0022470 Steroid DWF4/CYP90B1 low borderline
GbarA02G0009030 Steroid DWF4/CYP90B1 low borderline
GbarA02G0013670 Steroid DWF4/CYP90B1 low borderline
GbarA02G0016480 Steroid DWF4/CYP90B1 low borderline
GbarA02G0018280 Steroid DWF4/CYP90B1 low borderline
GbarA02G0018290 Steroid DWF4/CYP90B1 low borderline
GbarA03G0001930 Steroid DWF4/CYP90B1 low borderline
GbarA03G0001940 Steroid DWF4/CYP90B1 low borderline
GbarA03G0001970 Steroid DWF4/CYP90B1 low borderline
GbarA03G0002330 Steroid DWF4/CYP90B1 medium borderline
GbarA03G0005600 Steroid DWF4/CYP90B1 medium borderline
GbarA03G0006470 Steroid DWF4/CYP90B1 low borderline
GbarA03G0008940 Steroid DWF4/CYP90B1 low borderline
GbarA03G0008970 Steroid DWF4/CYP90B1 low borderline
GbarA03G0015330 Steroid DWF4/CYP90B1 low borderline
GbarA04G0001900 Steroid DWF4/CYP90B1 low borderline
GbarA04G0007550 Steroid DWF4/CYP90B1 low borderline
GbarA05G0004200 Steroid DWF4/CYP90B1 low borderline
GbarA05G0006910 Steroid DWF4/CYP90B1 low borderline
GbarA05G0011620 Steroid DWF4/CYP90B1 medium borderline
GbarA05G0015010 Steroid DWF4/CYP90B1 low borderline
GbarA05G0019530 Steroid DWF4/CYP90B1 medium borderline
GbarA05G0019760 Steroid DWF4/CYP90B1 low borderline
GbarA05G0019810 Steroid DWF4/CYP90B1 low borderline
GbarA05G0019820 Steroid DWF4/CYP90B1 low borderline
GbarA05G0020760 Steroid DWF4/CYP90B1 low borderline
GbarA05G0026400 Steroid DWF4/CYP90B1 low borderline
GbarA05G0029630 Steroid DWF4/CYP90B1 low borderline
GbarA05G0037390 Steroid DWF4/CYP90B1 medium borderline
GbarA05G0039890 Steroid DWF4/CYP90B1 medium borderline