PlantSME Plant secondary metabolism enzyme database

Gossypium barbadense (gossypium_barbadense)

Imported from atlas release summary for Gossypium barbadense.

4400
Candidate Protein Records
3645
Pathway-Level Records
9305
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1055 21 BAHD (388) View species results
Alkaloid pathway 824 25 7DLGT (140) View species results
Phenylpropanoid pathway 824 12 POD (325) View species results
Flavonoid pathway 411 13 UFGT (256) View species results
Rosmarinic acid pathway 307 7 C4H (123) View species results
Steroid pathway 224 12 CAS (104) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 3759 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 675 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Protein/Isoform Record Pathway Family Confidence Status
GbarA05G0042530 Steroid DWF4/CYP90B1 medium borderline
GbarA06G0001420 Steroid DWF4/CYP90B1 low borderline
GbarA06G0002270 Steroid DWF4/CYP90B1 low borderline
GbarA06G0020640 Steroid DWF4/CYP90B1 medium borderline
GbarA07G0004590 Steroid DWF4/CYP90B1 low borderline
GbarA07G0008630 Steroid DWF4/CYP90B1 low borderline
GbarA07G0010890 Steroid DWF4/CYP90B1 medium borderline
GbarA07G0013180 Steroid DWF4/CYP90B1 low borderline
GbarA07G0020010 Steroid DWF4/CYP90B1 medium borderline
GbarA07G0020120 Steroid DWF4/CYP90B1 medium borderline
GbarA07G0020500 Steroid DWF4/CYP90B1 low borderline
GbarA07G0023780 Steroid DWF4/CYP90B1 low borderline
GbarA07G0023790 Steroid DWF4/CYP90B1 low borderline
GbarA08G0000820 Steroid DWF4/CYP90B1 low borderline
GbarA08G0001870 Steroid DWF4/CYP90B1 medium borderline
GbarA08G0015410 Steroid DWF4/CYP90B1 low borderline
GbarA08G0018410 Steroid DWF4/CYP90B1 medium borderline
GbarA08G0020170 Steroid DWF4/CYP90B1 low borderline
GbarA08G0025080 Steroid DWF4/CYP90B1 low borderline
GbarA09G0005150 Steroid DWF4/CYP90B1 low borderline
GbarA09G0008570 Steroid DWF4/CYP90B1 low borderline
GbarA09G0019640 Steroid DWF4/CYP90B1 low borderline
GbarA09G0020940 Steroid DWF4/CYP90B1 low borderline
GbarA09G0020960 Steroid DWF4/CYP90B1 low borderline
GbarA09G0022320 Steroid DWF4/CYP90B1 low borderline
GbarA10G0001370 Steroid DWF4/CYP90B1 low borderline
GbarA10G0021100 Steroid DWF4/CYP90B1 low borderline
GbarA10G0021110 Steroid DWF4/CYP90B1 low borderline
GbarA10G0021130 Steroid DWF4/CYP90B1 low borderline
GbarA10G0021140 Steroid DWF4/CYP90B1 low borderline
GbarA10G0021150 Steroid DWF4/CYP90B1 low borderline
GbarA10G0021690 Steroid DWF4/CYP90B1 low borderline
GbarA10G0021850 Steroid DWF4/CYP90B1 low borderline
GbarA10G0021860 Steroid DWF4/CYP90B1 low borderline
GbarA10G0023680 Steroid DWF4/CYP90B1 low borderline
GbarA11G0003780 Steroid DWF4/CYP90B1 low borderline
GbarA11G0008480 Steroid DWF4/CYP90B1 low borderline
GbarA11G0008490 Steroid DWF4/CYP90B1 low borderline
GbarA11G0008500 Steroid DWF4/CYP90B1 low borderline
GbarA11G0015410 Steroid DWF4/CYP90B1 medium borderline
GbarA11G0017000 Steroid DWF4/CYP90B1 low borderline
GbarA11G0019710 Steroid DWF4/CYP90B1 low borderline
GbarA11G0023340 Steroid DWF4/CYP90B1 low borderline
GbarA11G0023360 Steroid DWF4/CYP90B1 low borderline
GbarA11G0034490 Steroid DWF4/CYP90B1 low borderline
GbarA11G0034510 Steroid DWF4/CYP90B1 low borderline
GbarA11G0036790 Steroid DWF4/CYP90B1 low borderline
GbarA12G0005340 Steroid DWF4/CYP90B1 low borderline
GbarA12G0005620 Steroid DWF4/CYP90B1 low borderline
GbarA12G0007980 Steroid DWF4/CYP90B1 low borderline