PlantSME Plant secondary metabolism enzyme database

Gossypium barbadense (gossypium_barbadense)

Imported from atlas release summary for Gossypium barbadense.

4400
Candidate Protein Records
3645
Pathway-Level Records
9305
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1055 21 BAHD (388) View species results
Alkaloid pathway 824 25 7DLGT (140) View species results
Phenylpropanoid pathway 824 12 POD (325) View species results
Flavonoid pathway 411 13 UFGT (256) View species results
Rosmarinic acid pathway 307 7 C4H (123) View species results
Steroid pathway 224 12 CAS (104) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 3759 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 675 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Protein/Isoform Record Pathway Family Confidence Status
GbarA12G0008000 Steroid DWF4/CYP90B1 low borderline
GbarA12G0018350 Steroid DWF4/CYP90B1 low borderline
GbarA12G0020120 Steroid DWF4/CYP90B1 low borderline
GbarA12G0027700 Steroid DWF4/CYP90B1 low borderline
GbarA12G0027950 Steroid DWF4/CYP90B1 medium borderline
GbarA12G0028450 Steroid DWF4/CYP90B1 low borderline
GbarA13G0002330 Steroid DWF4/CYP90B1 low borderline
GbarA13G0002350 Steroid DWF4/CYP90B1 low borderline
GbarA13G0008610 Steroid DWF4/CYP90B1 medium borderline
GbarA13G0014500 Steroid DWF4/CYP90B1 low borderline
GbarA13G0022760 Steroid DWF4/CYP90B1 low borderline
GbarD01G0008590 Steroid DWF4/CYP90B1 low borderline
GbarD01G0008610 Steroid DWF4/CYP90B1 low borderline
GbarD01G0008670 Steroid DWF4/CYP90B1 low borderline
GbarD01G0022130 Steroid DWF4/CYP90B1 low borderline
GbarD02G0009150 Steroid DWF4/CYP90B1 low borderline
GbarD02G0017110 Steroid DWF4/CYP90B1 low borderline
GbarD02G0017150 Steroid DWF4/CYP90B1 low borderline
GbarD03G0002290 Steroid DWF4/CYP90B1 low borderline
GbarD03G0002320 Steroid DWF4/CYP90B1 low borderline
GbarD03G0002330 Steroid DWF4/CYP90B1 low borderline
GbarD03G0002610 Steroid DWF4/CYP90B1 low borderline
GbarD03G0005200 Steroid DWF4/CYP90B1 low borderline
GbarD03G0005860 Steroid DWF4/CYP90B1 low borderline
GbarD03G0011670 Steroid DWF4/CYP90B1 low borderline
GbarD03G0013010 Steroid DWF4/CYP90B1 low borderline
GbarD03G0014060 Steroid DWF4/CYP90B1 medium borderline
GbarD03G0017360 Steroid DWF4/CYP90B1 medium borderline
GbarD03G0017670 Steroid DWF4/CYP90B1 low borderline
GbarD03G0017690 Steroid DWF4/CYP90B1 low borderline
GbarD03G0017720 Steroid DWF4/CYP90B1 low borderline
GbarD03G0017760 Steroid DWF4/CYP90B1 low borderline
GbarD03G0017780 Steroid DWF4/CYP90B1 low borderline
GbarD04G0001210 Steroid DWF4/CYP90B1 medium borderline
GbarD04G0003850 Steroid DWF4/CYP90B1 medium borderline
GbarD04G0006120 Steroid DWF4/CYP90B1 medium borderline
GbarD04G0011280 Steroid DWF4/CYP90B1 low borderline
GbarD05G0003380 Steroid DWF4/CYP90B1 low borderline
GbarD05G0006910 Steroid DWF4/CYP90B1 low borderline
GbarD05G0011620 Steroid DWF4/CYP90B1 medium borderline
GbarD05G0019930 Steroid DWF4/CYP90B1 medium borderline
GbarD05G0020150 Steroid DWF4/CYP90B1 low borderline
GbarD05G0020180 Steroid DWF4/CYP90B1 low borderline
GbarD05G0021080 Steroid DWF4/CYP90B1 low borderline
GbarD05G0026620 Steroid DWF4/CYP90B1 low borderline
GbarD05G0029810 Steroid DWF4/CYP90B1 low borderline
GbarD06G0001250 Steroid DWF4/CYP90B1 low borderline
GbarD06G0002110 Steroid DWF4/CYP90B1 low borderline
GbarD06G0016130 Steroid DWF4/CYP90B1 low borderline
GbarD06G0023690 Steroid DWF4/CYP90B1 low borderline