PlantSME Plant secondary metabolism enzyme database

Gossypium barbadense (gossypium_barbadense)

Imported from atlas release summary for Gossypium barbadense.

4400
Candidate Protein Records
3645
Pathway-Level Records
9305
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1055 21 BAHD (388) View species results
Alkaloid pathway 824 25 7DLGT (140) View species results
Phenylpropanoid pathway 824 12 POD (325) View species results
Flavonoid pathway 411 13 UFGT (256) View species results
Rosmarinic acid pathway 307 7 C4H (123) View species results
Steroid pathway 224 12 CAS (104) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 3759 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 675 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Protein/Isoform Record Pathway Family Confidence Status
GbarD07G0004620 Steroid DWF4/CYP90B1 low borderline
GbarD07G0008650 Steroid DWF4/CYP90B1 low borderline
GbarD07G0008660 Steroid DWF4/CYP90B1 low borderline
GbarD07G0010760 Steroid DWF4/CYP90B1 medium borderline
GbarD07G0013020 Steroid DWF4/CYP90B1 low borderline
GbarD07G0019970 Steroid DWF4/CYP90B1 medium borderline
GbarD07G0020050 Steroid DWF4/CYP90B1 medium borderline
GbarD07G0020400 Steroid DWF4/CYP90B1 low borderline
GbarD07G0023210 Steroid DWF4/CYP90B1 low borderline
GbarD08G0001940 Steroid DWF4/CYP90B1 medium borderline
GbarD08G0015610 Steroid DWF4/CYP90B1 low borderline
GbarD08G0018590 Steroid DWF4/CYP90B1 medium borderline
GbarD08G0018600 Steroid DWF4/CYP90B1 medium borderline
GbarD08G0020300 Steroid DWF4/CYP90B1 low borderline
GbarD09G0003360 Steroid DWF4/CYP90B1 low borderline
GbarD09G0004260 Steroid DWF4/CYP90B1 low borderline
GbarD09G0005830 Steroid DWF4/CYP90B1 low borderline
GbarD09G0015150 Steroid DWF4/CYP90B1 low borderline
GbarD09G0019120 Steroid DWF4/CYP90B1 low borderline
GbarD09G0020350 Steroid DWF4/CYP90B1 low borderline
GbarD09G0020860 Steroid DWF4/CYP90B1 medium borderline
GbarD09G0021650 Steroid DWF4/CYP90B1 low borderline
GbarD09G0021660 Steroid DWF4/CYP90B1 low borderline
GbarD10G0001480 Steroid DWF4/CYP90B1 low borderline
GbarD10G0022240 Steroid DWF4/CYP90B1 low borderline
GbarD10G0022250 Steroid DWF4/CYP90B1 low borderline
GbarD10G0022270 Steroid DWF4/CYP90B1 low borderline
GbarD10G0022280 Steroid DWF4/CYP90B1 low borderline
GbarD10G0022290 Steroid DWF4/CYP90B1 low borderline
GbarD10G0022910 Steroid DWF4/CYP90B1 low borderline
GbarD10G0025350 Steroid DWF4/CYP90B1 low borderline
GbarD11G0003940 Steroid DWF4/CYP90B1 low borderline
GbarD11G0008860 Steroid DWF4/CYP90B1 low borderline
GbarD11G0008870 Steroid DWF4/CYP90B1 low borderline
GbarD11G0008880 Steroid DWF4/CYP90B1 low borderline
GbarD11G0015660 Steroid DWF4/CYP90B1 medium borderline
GbarD11G0017390 Steroid DWF4/CYP90B1 low borderline
GbarD11G0020030 Steroid DWF4/CYP90B1 low borderline
GbarD11G0021180 Steroid DWF4/CYP90B1 low borderline
GbarD11G0023030 Steroid DWF4/CYP90B1 low borderline
GbarD11G0034560 Steroid DWF4/CYP90B1 low borderline
GbarD11G0034570 Steroid DWF4/CYP90B1 low borderline
GbarD11G0034580 Steroid DWF4/CYP90B1 low borderline
GbarD11G0037080 Steroid DWF4/CYP90B1 low borderline
GbarD12G0005490 Steroid DWF4/CYP90B1 low borderline
GbarD12G0005820 Steroid DWF4/CYP90B1 low borderline
GbarD12G0018300 Steroid DWF4/CYP90B1 low borderline
GbarD12G0020100 Steroid DWF4/CYP90B1 low borderline
GbarD12G0022630 Steroid DWF4/CYP90B1 low borderline
GbarD12G0027970 Steroid DWF4/CYP90B1 low borderline