PlantSME Plant secondary metabolism enzyme database

Gossypium barbadense (gossypium_barbadense)

Imported from atlas release summary for Gossypium barbadense.

4400
Candidate Protein Records
3645
Pathway-Level Records
9305
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1055 21 BAHD (388) View species results
Alkaloid pathway 824 25 7DLGT (140) View species results
Phenylpropanoid pathway 824 12 POD (325) View species results
Flavonoid pathway 411 13 UFGT (256) View species results
Rosmarinic acid pathway 307 7 C4H (123) View species results
Steroid pathway 224 12 CAS (104) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 3759 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 675 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Phenylpropanoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
GbarD13G0002960 Phenylpropanoid C3'H/CYP98A medium borderline
GbarD13G0003700 Phenylpropanoid C3'H/CYP98A low borderline
GbarD13G0003730 Phenylpropanoid C3'H/CYP98A low borderline
GbarD13G0003940 Phenylpropanoid C3'H/CYP98A low borderline
GbarD13G0006340 Phenylpropanoid C3'H/CYP98A low borderline
GbarD13G0006350 Phenylpropanoid C3'H/CYP98A low borderline
GbarD13G0008000 Phenylpropanoid C3'H/CYP98A low borderline
GbarD13G0008610 Phenylpropanoid C3'H/CYP98A medium borderline
GbarD13G0008660 Phenylpropanoid C3'H/CYP98A low borderline
GbarD13G0008820 Phenylpropanoid C3'H/CYP98A low borderline
GbarD13G0009230 Phenylpropanoid C3'H/CYP98A low borderline
GbarD13G0009470 Phenylpropanoid C3'H/CYP98A low borderline
GbarD13G0013310 Phenylpropanoid C3'H/CYP98A low borderline
GbarD13G0013450 Phenylpropanoid C3'H/CYP98A low borderline
GbarD13G0013850 Phenylpropanoid C3'H/CYP98A medium borderline
GbarD13G0015130 Phenylpropanoid C3'H/CYP98A medium borderline
GbarD13G0015260 Phenylpropanoid C3'H/CYP98A medium borderline
GbarD13G0015330 Phenylpropanoid C3'H/CYP98A medium borderline
GbarD13G0017740 Phenylpropanoid C3'H/CYP98A low borderline
GbarD13G0017800 Phenylpropanoid C3'H/CYP98A medium borderline
GbarD13G0022660 Phenylpropanoid C3'H/CYP98A medium borderline
GbarD13G0026250 Phenylpropanoid C3'H/CYP98A medium borderline
Gbarscaffold1817_obj_A060001490 Phenylpropanoid C3'H/CYP98A low borderline
Gbarscaffold6167_obj0006610 Phenylpropanoid C3'H/CYP98A medium borderline
GbarA01G0019520 Phenylpropanoid C4H/CYP73A low borderline
GbarA02G0002470 Phenylpropanoid C4H/CYP73A medium borderline
GbarA02G0002490 Phenylpropanoid C4H/CYP73A medium borderline
GbarA02G0002500 Phenylpropanoid C4H/CYP73A medium borderline
GbarA02G0002540 Phenylpropanoid C4H/CYP73A medium borderline
GbarA02G0002560 Phenylpropanoid C4H/CYP73A medium borderline
GbarA02G0017980 Phenylpropanoid C4H/CYP73A low borderline
GbarA03G0001950 Phenylpropanoid C4H/CYP73A low borderline
GbarA04G0015680 Phenylpropanoid C4H/CYP73A medium borderline
GbarA04G0017450 Phenylpropanoid C4H/CYP73A medium borderline
GbarA04G0017460 Phenylpropanoid C4H/CYP73A medium borderline
GbarA06G0001340 Phenylpropanoid C4H/CYP73A low borderline
GbarA06G0001410 Phenylpropanoid C4H/CYP73A low borderline
GbarA06G0023330 Phenylpropanoid C4H/CYP73A low borderline
GbarA08G0020220 Phenylpropanoid C4H/CYP73A low borderline
GbarA09G0021600 Phenylpropanoid C4H/CYP73A low borderline
GbarA10G0021690 Phenylpropanoid C4H/CYP73A medium borderline
GbarA11G0019700 Phenylpropanoid C4H/CYP73A low borderline
GbarA12G0002790 Phenylpropanoid C4H/CYP73A medium borderline
GbarA13G0003780 Phenylpropanoid C4H/CYP73A medium borderline
GbarA13G0006080 Phenylpropanoid C4H/CYP73A low borderline
GbarA13G0006110 Phenylpropanoid C4H/CYP73A medium borderline
GbarA13G0009250 Phenylpropanoid C4H/CYP73A medium borderline
GbarA13G0014450 Phenylpropanoid C4H/CYP73A low borderline
GbarD02G0002720 Phenylpropanoid C4H/CYP73A medium borderline
GbarD02G0002740 Phenylpropanoid C4H/CYP73A medium borderline