PlantSME Plant secondary metabolism enzyme database

Gossypium barbadense (gossypium_barbadense)

Imported from atlas release summary for Gossypium barbadense.

4400
Candidate Protein Records
3645
Pathway-Level Records
9305
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1055 21 BAHD (388) View species results
Alkaloid pathway 824 25 7DLGT (140) View species results
Phenylpropanoid pathway 824 12 POD (325) View species results
Flavonoid pathway 411 13 UFGT (256) View species results
Rosmarinic acid pathway 307 7 C4H (123) View species results
Steroid pathway 224 12 CAS (104) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 3759 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 675 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Phenylpropanoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
GbarD02G0002750 Phenylpropanoid C4H/CYP73A medium borderline
GbarD02G0002770 Phenylpropanoid C4H/CYP73A medium borderline
GbarD02G0002780 Phenylpropanoid C4H/CYP73A medium borderline
GbarD02G0002790 Phenylpropanoid C4H/CYP73A medium borderline
GbarD02G0002800 Phenylpropanoid C4H/CYP73A medium borderline
GbarD03G0017680 Phenylpropanoid C4H/CYP73A low borderline
GbarD03G0017710 Phenylpropanoid C4H/CYP73A low borderline
GbarD04G0020940 Phenylpropanoid C4H/CYP73A medium borderline
GbarD04G0020950 Phenylpropanoid C4H/CYP73A medium borderline
GbarD05G0021130 Phenylpropanoid C4H/CYP73A low borderline
GbarD06G0001210 Phenylpropanoid C4H/CYP73A low borderline
GbarD07G0010070 Phenylpropanoid C4H/CYP73A medium borderline
GbarD07G0020690 Phenylpropanoid C4H/CYP73A medium borderline
GbarD08G0020330 Phenylpropanoid C4H/CYP73A low borderline
GbarD09G0013690 Phenylpropanoid C4H/CYP73A low borderline
GbarD09G0020370 Phenylpropanoid C4H/CYP73A low borderline
GbarD10G0022710 Phenylpropanoid C4H/CYP73A medium borderline
GbarD11G0003950 Phenylpropanoid C4H/CYP73A low borderline
GbarD13G0003690 Phenylpropanoid C4H/CYP73A medium borderline
GbarD13G0006490 Phenylpropanoid C4H/CYP73A medium borderline
GbarD13G0008810 Phenylpropanoid C4H/CYP73A medium borderline
GbarD13G0008840 Phenylpropanoid C4H/CYP73A medium borderline
GbarD13G0009460 Phenylpropanoid C4H/CYP73A low borderline
GbarA01G0007090 Phenylpropanoid CAD medium borderline
GbarA01G0020580 Phenylpropanoid CAD low borderline
GbarA02G0007130 Phenylpropanoid CAD low borderline
GbarA02G0015260 Phenylpropanoid CAD medium borderline
GbarA02G0016280 Phenylpropanoid CAD medium pass
GbarA02G0017130 Phenylpropanoid CAD medium pass
GbarA03G0016090 Phenylpropanoid CAD low borderline
GbarA03G0021000 Phenylpropanoid CAD medium pass
GbarA04G0002990 Phenylpropanoid CAD medium pass
GbarA04G0004910 Phenylpropanoid CAD low borderline
GbarA04G0006720 Phenylpropanoid CAD low borderline
GbarA04G0012810 Phenylpropanoid CAD low borderline
GbarA05G0007120 Phenylpropanoid CAD medium borderline
GbarA05G0016350 Phenylpropanoid CAD low borderline
GbarA05G0016810 Phenylpropanoid CAD medium borderline
GbarA05G0018400 Phenylpropanoid CAD medium pass
GbarA05G0029240 Phenylpropanoid CAD low borderline
GbarA05G0029250 Phenylpropanoid CAD low borderline
GbarA05G0031830 Phenylpropanoid CAD low borderline
GbarA05G0037830 Phenylpropanoid CAD low borderline
GbarA06G0000810 Phenylpropanoid CAD medium borderline
GbarA07G0013420 Phenylpropanoid CAD medium borderline
GbarA07G0013430 Phenylpropanoid CAD medium borderline
GbarA07G0022480 Phenylpropanoid CAD low borderline
GbarA07G0023020 Phenylpropanoid CAD low borderline
GbarA07G0024880 Phenylpropanoid CAD low borderline
GbarA08G0012830 Phenylpropanoid CAD low borderline