PlantSME Plant secondary metabolism enzyme database

Gossypium barbadense (gossypium_barbadense)

Imported from atlas release summary for Gossypium barbadense.

4400
Candidate Protein Records
3645
Pathway-Level Records
9305
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1055 21 BAHD (388) View species results
Alkaloid pathway 824 25 7DLGT (140) View species results
Phenylpropanoid pathway 824 12 POD (325) View species results
Flavonoid pathway 411 13 UFGT (256) View species results
Rosmarinic acid pathway 307 7 C4H (123) View species results
Steroid pathway 224 12 CAS (104) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 3759 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 675 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
GbarD12G0020500 Terpenoid CYP76 medium borderline
GbarD12G0022630 Terpenoid CYP76 medium borderline
GbarD12G0022640 Terpenoid CYP76 medium borderline
GbarD12G0024230 Terpenoid CYP76 medium borderline
GbarD12G0026150 Terpenoid CYP76 medium borderline
GbarD12G0028680 Terpenoid CYP76 low borderline
GbarD12G0028690 Terpenoid CYP76 medium pass
GbarD12G0028700 Terpenoid CYP76 medium pass
GbarD12G0028710 Terpenoid CYP76 medium pass
GbarD12G0028720 Terpenoid CYP76 medium borderline
GbarD13G0002320 Terpenoid CYP76 medium borderline
GbarD13G0002960 Terpenoid CYP76 medium borderline
GbarD13G0006490 Terpenoid CYP76 low borderline
GbarD13G0008610 Terpenoid CYP76 medium borderline
GbarD13G0008840 Terpenoid CYP76 low borderline
GbarD13G0009450 Terpenoid CYP76 medium pass
GbarD13G0009470 Terpenoid CYP76 medium pass
GbarD13G0009480 Terpenoid CYP76 medium pass
GbarD13G0013850 Terpenoid CYP76 medium borderline
GbarD13G0017740 Terpenoid CYP76 low borderline
GbarD13G0026250 Terpenoid CYP76 medium pass
Gbarscaffold6167_obj0006610 Terpenoid CYP76 medium pass
GbarA07G0006730 Terpenoid DXR low borderline
GbarA09G0018780 Terpenoid DXR high pass
GbarA11G0000100 Terpenoid DXR high pass
GbarD07G0006660 Terpenoid DXR low borderline
GbarD09G0018300 Terpenoid DXR high pass
GbarD11G0000150 Terpenoid DXR medium pass
GbarA08G0002660 Terpenoid DXS medium pass
GbarA08G0002690 Terpenoid DXS medium pass
GbarA08G0002710 Terpenoid DXS medium pass
GbarA08G0009480 Terpenoid DXS medium pass
GbarA10G0010580 Terpenoid DXS medium pass
GbarA12G0010340 Terpenoid DXS medium pass
GbarA13G0003660 Terpenoid DXS low borderline
GbarD08G0002820 Terpenoid DXS medium pass
GbarD08G0002840 Terpenoid DXS medium pass
GbarD08G0002850 Terpenoid DXS medium pass
GbarD08G0010410 Terpenoid DXS medium pass
GbarD10G0018290 Terpenoid DXS medium pass
GbarD12G0007930 Terpenoid DXS medium pass
GbarA01G0008970 Terpenoid FPPS medium pass
GbarA02G0020400 Terpenoid FPPS low borderline
GbarA04G0001400 Terpenoid FPPS medium borderline
GbarA04G0013480 Terpenoid FPPS medium pass
GbarA04G0013490 Terpenoid FPPS low borderline
GbarA05G0017700 Terpenoid FPPS medium pass
GbarA09G0010840 Terpenoid FPPS medium pass
GbarA09G0018080 Terpenoid FPPS medium pass
GbarA11G0003810 Terpenoid FPPS medium pass