PlantSME Plant secondary metabolism enzyme database

Gossypium barbadense (gossypium_barbadense)

Imported from atlas release summary for Gossypium barbadense.

4400
Candidate Protein Records
3645
Pathway-Level Records
9305
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1055 21 BAHD (388) View species results
Alkaloid pathway 824 25 7DLGT (140) View species results
Phenylpropanoid pathway 824 12 POD (325) View species results
Flavonoid pathway 411 13 UFGT (256) View species results
Rosmarinic acid pathway 307 7 C4H (123) View species results
Steroid pathway 224 12 CAS (104) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 3759 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 675 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
GbarD13G0008090 Terpenoid MVD medium pass
GbarA01G0003030 Terpenoid MVK low borderline
GbarA03G0019410 Terpenoid MVK low borderline
GbarA09G0012390 Terpenoid MVK low borderline
GbarA09G0026220 Terpenoid MVK low borderline
GbarA11G0033720 Terpenoid MVK medium pass
GbarD01G0002870 Terpenoid MVK low borderline
GbarD02G0021120 Terpenoid MVK low borderline
GbarD09G0011990 Terpenoid MVK low borderline
GbarD09G0025460 Terpenoid MVK low borderline
GbarD11G0029930 Terpenoid MVK high pass
GbarD11G0033880 Terpenoid MVK medium pass
GbarA12G0022550 Terpenoid PMK medium pass
GbarD12G0022720 Terpenoid PMK medium pass
GbarA01G0007000 Terpenoid TPS medium pass
GbarA01G0007010 Terpenoid TPS medium pass
GbarA01G0007030 Terpenoid TPS medium pass
GbarA01G0009380 Terpenoid TPS medium pass
GbarA01G0009730 Terpenoid TPS medium pass
GbarA01G0021830 Terpenoid TPS medium pass
GbarA04G0002200 Terpenoid TPS medium pass
GbarA04G0002230 Terpenoid TPS medium pass
GbarA04G0002240 Terpenoid TPS medium pass
GbarA04G0002250 Terpenoid TPS medium pass
GbarA04G0002990 Terpenoid TPS medium pass
GbarA04G0004910 Terpenoid TPS medium pass
GbarA04G0012810 Terpenoid TPS medium pass
GbarA05G0008230 Terpenoid TPS medium pass
GbarA05G0016350 Terpenoid TPS medium pass
GbarA05G0016360 Terpenoid TPS medium pass
GbarA05G0029240 Terpenoid TPS medium pass
GbarA05G0029250 Terpenoid TPS medium pass
GbarA05G0031830 Terpenoid TPS medium pass
GbarA08G0007310 Terpenoid TPS medium pass
GbarA09G0000860 Terpenoid TPS medium pass
GbarA09G0003550 Terpenoid TPS medium pass
GbarA09G0003560 Terpenoid TPS medium pass
GbarA09G0003570 Terpenoid TPS medium pass
GbarA09G0003580 Terpenoid TPS medium pass
GbarA09G0003590 Terpenoid TPS medium pass
GbarA10G0000510 Terpenoid TPS low borderline
GbarA10G0000520 Terpenoid TPS medium pass
GbarA10G0000530 Terpenoid TPS medium pass
GbarA10G0001770 Terpenoid TPS medium pass
GbarA10G0025550 Terpenoid TPS medium pass
GbarA10G0025570 Terpenoid TPS medium pass
GbarA11G0012840 Terpenoid TPS medium pass
GbarA11G0015490 Terpenoid TPS medium pass
GbarA11G0026550 Terpenoid TPS low borderline
GbarA11G0028200 Terpenoid TPS medium pass