PlantSME Plant secondary metabolism enzyme database

Gossypium barbadense (gossypium_barbadense)

Imported from atlas release summary for Gossypium barbadense.

4400
Candidate Protein Records
3645
Pathway-Level Records
9305
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1055 21 BAHD (388) View species results
Alkaloid pathway 824 25 7DLGT (140) View species results
Phenylpropanoid pathway 824 12 POD (325) View species results
Flavonoid pathway 411 13 UFGT (256) View species results
Rosmarinic acid pathway 307 7 C4H (123) View species results
Steroid pathway 224 12 CAS (104) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 3759 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 675 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Terpenoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
GbarA08G0022490 Terpenoid HDS/IspG high pass
GbarD08G0022540 Terpenoid HDS/IspG high pass
GbarA01G0001410 Terpenoid HMGR medium pass
GbarA03G0019310 Terpenoid HMGR medium pass
GbarA04G0013360 Terpenoid HMGR medium pass
GbarA12G0001140 Terpenoid HMGR medium pass
GbarA13G0006710 Terpenoid HMGR medium pass
GbarD01G0001290 Terpenoid HMGR medium pass
GbarD01G0013870 Terpenoid HMGR medium pass
GbarD02G0021020 Terpenoid HMGR medium pass
GbarD02G0021030 Terpenoid HMGR medium pass
GbarD04G0016760 Terpenoid HMGR medium pass
GbarD12G0001210 Terpenoid HMGR medium pass
GbarD13G0005940 Terpenoid HMGR medium pass
Gbarscaffold1156_obj_D020000310 Terpenoid HMGR medium pass
Gbarscaffold3351_obj_D020003850 Terpenoid HMGR medium pass
GbarA03G0002180 Terpenoid HMGS high pass
GbarA08G0020390 Terpenoid HMGS high pass
GbarA10G0011540 Terpenoid HMGS medium pass
GbarA12G0001610 Terpenoid HMGS medium pass
GbarA12G0005400 Terpenoid HMGS medium pass
GbarA12G0024480 Terpenoid HMGS high pass
GbarD03G0017460 Terpenoid HMGS high pass
GbarD08G0020530 Terpenoid HMGS high pass
GbarD12G0024600 Terpenoid HMGS high pass
GbarA08G0025870 Terpenoid IDI medium pass
GbarD08G0025800 Terpenoid IDI medium pass
GbarA03G0024440 Terpenoid MCT/IspD low borderline
GbarA06G0012470 Terpenoid MCT/IspD high pass
GbarA08G0016060 Terpenoid MCT/IspD low borderline
GbarA12G0004720 Terpenoid MCT/IspD low borderline
GbarD02G0026060 Terpenoid MCT/IspD low borderline
GbarD06G0012910 Terpenoid MCT/IspD high pass
GbarD12G0004840 Terpenoid MCT/IspD low borderline
GbarA02G0011810 Terpenoid MDS/IspF high pass
GbarA06G0005160 Terpenoid MDS/IspF low borderline
GbarA08G0013560 Terpenoid MDS/IspF high pass
GbarD03G0008820 Terpenoid MDS/IspF high pass
GbarD08G0013770 Terpenoid MDS/IspF high pass
GbarA05G0017570 Terpenoid MVD low borderline
GbarA06G0017990 Terpenoid MVD low borderline
GbarA13G0001030 Terpenoid MVD low borderline
GbarA13G0001140 Terpenoid MVD medium pass
GbarD05G0017910 Terpenoid MVD low borderline
GbarD06G0008330 Terpenoid MVD low borderline
GbarD06G0018290 Terpenoid MVD low borderline
GbarD10G0011010 Terpenoid MVD medium pass
GbarD10G0015350 Terpenoid MVD low borderline
GbarD13G0001070 Terpenoid MVD low borderline
GbarD13G0001130 Terpenoid MVD medium pass