PlantSME Plant secondary metabolism enzyme database

Gossypium barbadense (gossypium_barbadense)

Imported from atlas release summary for Gossypium barbadense.

4400
Candidate Protein Records
3645
Pathway-Level Records
9305
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1055 21 BAHD (388) View species results
Alkaloid pathway 824 25 7DLGT (140) View species results
Phenylpropanoid pathway 824 12 POD (325) View species results
Flavonoid pathway 411 13 UFGT (256) View species results
Rosmarinic acid pathway 307 7 C4H (123) View species results
Steroid pathway 224 12 CAS (104) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 3759 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 675 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
Reset
Protein/Isoform Record Pathway Family Confidence Status Best Target
GbarA05G0036750 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
GbarA05G0036760 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
GbarA06G0007210 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
GbarA07G0007170 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
GbarA07G0009350 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
GbarA07G0020900 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
GbarA08G0000660 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
GbarA08G0018500 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
GbarA08G0019280 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
GbarA08G0019470 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
GbarA08G0027360 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
GbarA10G0024500 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
GbarA11G0034560 Alkaloid NCS medium pass NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
GbarA12G0023050 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
GbarA12G0023060 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
GbarA12G0023090 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
GbarA13G0022480 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
GbarD01G0006280 Alkaloid NCS medium pass NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
GbarD01G0006290 Alkaloid NCS medium pass NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
GbarD02G0004730 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
GbarD02G0007920 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
GbarD02G0007940 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
GbarD04G0006680 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
GbarD04G0006690 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
GbarD05G0008740 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
GbarD05G0023500 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
GbarD05G0037910 Alkaloid NCS medium pass NCS__00005__sp_Q67A25_NCS_THLFG
GbarD05G0037920 Alkaloid NCS low borderline NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
GbarD06G0006980 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
GbarD07G0007030 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
GbarD07G0015830 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
GbarD08G0018670 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
GbarD08G0019400 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
GbarD08G0019410 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
GbarD08G0027320 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
GbarD10G0025590 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
GbarD11G0034650 Alkaloid NCS medium pass NCS__00003__sp_Q4QTJ1_NCS2_PAPSO
GbarD12G0023210 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
GbarD12G0023220 Alkaloid NCS medium pass NCS__00001__sp_A2A1A0_NCS1_COPJA
GbarD13G0022300 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
Gbarscaffold24413_obj_A080002500 Alkaloid NCS medium borderline NCS__00001__sp_A2A1A0_NCS1_COPJA
GbarA01G0001580 Alkaloid NMT medium pass NMT__00032__sp_Q5PP37_ATXR2_ARATH
GbarA01G0002590 Alkaloid NMT medium borderline NMT__00070__sp_W5U2K2_NMT_CATRO
GbarA01G0002620 Alkaloid NMT medium borderline NMT__00070__sp_W5U2K2_NMT_CATRO
GbarA01G0019230 Alkaloid NMT medium pass NMT__00046__sp_Q8VZ17_SUVH6_ARATH
GbarA01G0019270 Alkaloid NMT medium pass NMT__00019__sp_O22781_SUVH2_ARATH
GbarA01G0019310 Alkaloid NMT medium pass NMT__00019__sp_O22781_SUVH2_ARATH
GbarA01G0020340 Alkaloid NMT low borderline NMT__00035__sp_Q6K431_TRX1_ORYSJ
GbarA01G0022910 Alkaloid NMT low borderline NMT__00056__sp_Q9FNE9_ATXR6_ARATH
GbarA01G0022920 Alkaloid NMT low borderline NMT__00056__sp_Q9FNE9_ATXR6_ARATH