PlantSME Plant secondary metabolism enzyme database

Gossypium barbadense (gossypium_barbadense)

Imported from atlas release summary for Gossypium barbadense.

4400
Candidate Protein Records
3645
Pathway-Level Records
9305
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1055 21 BAHD (388) View species results
Alkaloid pathway 824 25 7DLGT (140) View species results
Phenylpropanoid pathway 824 12 POD (325) View species results
Flavonoid pathway 411 13 UFGT (256) View species results
Rosmarinic acid pathway 307 7 C4H (123) View species results
Steroid pathway 224 12 CAS (104) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 3759 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 675 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Protein/Isoform Record Pathway Family Confidence Status
GbarA07G0008240 Alkaloid LAMT medium borderline
GbarA10G0019530 Alkaloid LAMT medium borderline
GbarA10G0019550 Alkaloid LAMT medium borderline
GbarA12G0006310 Alkaloid LAMT medium borderline
GbarA12G0006320 Alkaloid LAMT medium borderline
GbarA13G0002690 Alkaloid LAMT medium borderline
GbarA13G0002700 Alkaloid LAMT medium borderline
GbarA13G0024200 Alkaloid LAMT medium borderline
GbarA13G0024210 Alkaloid LAMT medium borderline
GbarD01G0008270 Alkaloid LAMT medium borderline
GbarD02G0023750 Alkaloid LAMT medium borderline
GbarD05G0019540 Alkaloid LAMT medium borderline
GbarD07G0008250 Alkaloid LAMT medium borderline
GbarD10G0020450 Alkaloid LAMT medium borderline
GbarD10G0020540 Alkaloid LAMT medium borderline
GbarD11G0018500 Alkaloid LAMT medium borderline
GbarD12G0006470 Alkaloid LAMT medium borderline
GbarD13G0002660 Alkaloid LAMT medium borderline
GbarD13G0002670 Alkaloid LAMT medium borderline
GbarD13G0024130 Alkaloid LAMT medium borderline
GbarA01G0017190 Alkaloid MPO medium pass
GbarA02G0003280 Alkaloid MPO medium pass
GbarA03G0001900 Alkaloid MPO low borderline
GbarA03G0001910 Alkaloid MPO low borderline
GbarA03G0001920 Alkaloid MPO low borderline
GbarA03G0006920 Alkaloid MPO medium pass
GbarA08G0000410 Alkaloid MPO medium pass
GbarA08G0019850 Alkaloid MPO medium pass
GbarA09G0023590 Alkaloid MPO medium pass
GbarA11G0012440 Alkaloid MPO low borderline
GbarA12G0016410 Alkaloid MPO high pass
GbarD01G0010500 Alkaloid MPO medium pass
GbarD01G0018070 Alkaloid MPO high pass
GbarD02G0003550 Alkaloid MPO medium pass
GbarD03G0012570 Alkaloid MPO medium pass
GbarD03G0017790 Alkaloid MPO medium pass
GbarD07G0006130 Alkaloid MPO medium pass
GbarD08G0020060 Alkaloid MPO medium pass
GbarD09G0022990 Alkaloid MPO medium pass
GbarD12G0016490 Alkaloid MPO high pass
GbarA01G0006360 Alkaloid NCS medium pass
GbarA01G0006370 Alkaloid NCS medium pass
GbarA02G0007750 Alkaloid NCS medium borderline
GbarA02G0007760 Alkaloid NCS medium borderline
GbarA02G0012620 Alkaloid NCS medium borderline
GbarA04G0002880 Alkaloid NCS medium pass
GbarA04G0002900 Alkaloid NCS medium pass
GbarA04G0002910 Alkaloid NCS medium pass
GbarA05G0008820 Alkaloid NCS medium borderline
GbarA05G0023280 Alkaloid NCS medium borderline