PlantSME Plant secondary metabolism enzyme database

Gossypium barbadense (gossypium_barbadense)

Imported from atlas release summary for Gossypium barbadense.

3645
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1055 21 BAHD (388) View species results
Alkaloid pathway 824 25 7DLGT (140) View species results
Phenylpropanoid pathway 824 12 POD (325) View species results
Flavonoid pathway 411 13 UFGT (256) View species results
Rosmarinic acid pathway 307 7 C4H (123) View species results
Steroid pathway 224 12 CAS (104) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 3759 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 675 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Gene Pathway Family Confidence Status
GbarD12G0016760 Flavonoid 4CL medium pass
GbarD13G0009310 Flavonoid 4CL low borderline
GbarD13G0020080 Flavonoid 4CL medium pass
GbarD13G0025990 Flavonoid 4CL medium pass
Gbarscaffold257_obj_D020002830 Flavonoid 4CL medium pass
GbarA01G0007090 Flavonoid ANR medium borderline
GbarA01G0021500 Flavonoid ANR medium borderline
GbarA02G0015260 Flavonoid ANR medium borderline
GbarA05G0004330 Flavonoid ANR medium borderline
GbarA05G0007120 Flavonoid ANR medium borderline
GbarA05G0016810 Flavonoid ANR medium borderline
GbarA05G0019220 Flavonoid ANR medium borderline
GbarA05G0020230 Flavonoid ANR medium borderline
GbarA05G0027820 Flavonoid ANR medium borderline
GbarA05G0037740 Flavonoid ANR low borderline
GbarA06G0000810 Flavonoid ANR medium borderline
GbarA06G0008840 Flavonoid ANR low borderline
GbarA06G0019700 Flavonoid ANR low borderline
GbarA06G0019710 Flavonoid ANR low borderline
GbarA07G0013420 Flavonoid ANR medium borderline
GbarA07G0013430 Flavonoid ANR medium borderline
GbarA07G0015040 Flavonoid ANR medium borderline
GbarA07G0015810 Flavonoid ANR medium borderline
GbarA07G0015830 Flavonoid ANR medium borderline
GbarA07G0015850 Flavonoid ANR medium borderline
GbarA09G0012910 Flavonoid ANR medium borderline
GbarA11G0007570 Flavonoid ANR medium borderline
GbarA11G0007580 Flavonoid ANR medium borderline
GbarA11G0008320 Flavonoid ANR medium borderline
GbarA11G0009960 Flavonoid ANR low borderline
GbarA12G0001090 Flavonoid ANR medium borderline
GbarA12G0005010 Flavonoid ANR medium borderline
GbarA12G0025420 Flavonoid ANR medium borderline
GbarD01G0007060 Flavonoid ANR medium borderline
GbarD03G0004340 Flavonoid ANR medium borderline
GbarD03G0005500 Flavonoid ANR medium borderline
GbarD04G0005730 Flavonoid ANR low borderline
GbarD05G0004350 Flavonoid ANR medium borderline
GbarD05G0007100 Flavonoid ANR medium borderline
GbarD05G0012080 Flavonoid ANR medium borderline
GbarD05G0017110 Flavonoid ANR medium borderline
GbarD05G0019590 Flavonoid ANR medium borderline
GbarD05G0035400 Flavonoid ANR low borderline
GbarD06G0000660 Flavonoid ANR medium borderline
GbarD06G0008700 Flavonoid ANR low borderline
GbarD06G0019890 Flavonoid ANR low borderline
GbarD06G0019900 Flavonoid ANR low borderline
GbarD07G0013260 Flavonoid ANR medium borderline
GbarD07G0013270 Flavonoid ANR medium borderline
GbarD07G0015900 Flavonoid ANR medium borderline