PlantSME Plant secondary metabolism enzyme database

Gossypium barbadense (gossypium_barbadense)

Imported from atlas release summary for Gossypium barbadense.

3645
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1055 21 BAHD (388) View species results
Alkaloid pathway 824 25 7DLGT (140) View species results
Phenylpropanoid pathway 824 12 POD (325) View species results
Flavonoid pathway 411 13 UFGT (256) View species results
Rosmarinic acid pathway 307 7 C4H (123) View species results
Steroid pathway 224 12 CAS (104) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 3759 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 675 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Gene Pathway Family Confidence Status
GbarD07G0015910 Flavonoid ANR medium borderline
GbarD07G0015920 Flavonoid ANR medium borderline
GbarD11G0007900 Flavonoid ANR medium borderline
GbarD11G0007910 Flavonoid ANR medium borderline
GbarD11G0008710 Flavonoid ANR high pass
GbarD11G0010260 Flavonoid ANR low borderline
GbarD12G0005140 Flavonoid ANR medium borderline
GbarD12G0025620 Flavonoid ANR medium borderline
GbarA01G0003710 Flavonoid ANS/LDOX medium borderline
GbarA01G0004170 Flavonoid ANS/LDOX medium pass
GbarA01G0007220 Flavonoid ANS/LDOX medium borderline
GbarA02G0003990 Flavonoid ANS/LDOX low borderline
GbarA02G0004010 Flavonoid ANS/LDOX low borderline
GbarA06G0005570 Flavonoid ANS/LDOX medium pass
GbarA06G0016020 Flavonoid ANS/LDOX medium borderline
GbarA07G0014090 Flavonoid ANS/LDOX medium borderline
GbarA09G0024630 Flavonoid ANS/LDOX medium borderline
GbarA10G0004170 Flavonoid ANS/LDOX medium borderline
GbarA12G0000270 Flavonoid ANS/LDOX low borderline
GbarD01G0003590 Flavonoid ANS/LDOX medium borderline
GbarD01G0007200 Flavonoid ANS/LDOX medium borderline
GbarD01G0014510 Flavonoid ANS/LDOX medium borderline
GbarD03G0001470 Flavonoid ANS/LDOX medium borderline
GbarD04G0006680 Flavonoid ANS/LDOX medium borderline
GbarD05G0001360 Flavonoid ANS/LDOX low borderline
GbarD06G0016210 Flavonoid ANS/LDOX medium borderline
GbarD07G0013980 Flavonoid ANS/LDOX medium borderline
GbarD07G0023330 Flavonoid ANS/LDOX medium borderline
GbarD09G0007110 Flavonoid ANS/LDOX medium borderline
GbarD09G0009190 Flavonoid ANS/LDOX medium borderline
GbarD10G0004400 Flavonoid ANS/LDOX medium borderline
GbarD11G0033290 Flavonoid ANS/LDOX medium borderline
GbarD12G0000260 Flavonoid ANS/LDOX low borderline
GbarD13G0005080 Flavonoid ANS/LDOX low borderline
GbarA01G0019520 Flavonoid C4H low borderline
GbarA02G0002470 Flavonoid C4H medium borderline
GbarA02G0002490 Flavonoid C4H medium borderline
GbarA02G0002500 Flavonoid C4H medium borderline
GbarA02G0002540 Flavonoid C4H medium borderline
GbarA02G0002560 Flavonoid C4H medium borderline
GbarA04G0017450 Flavonoid C4H medium borderline
GbarA04G0017460 Flavonoid C4H medium borderline
GbarA06G0020640 Flavonoid C4H low borderline
GbarA08G0020220 Flavonoid C4H low borderline
GbarA10G0019440 Flavonoid C4H medium borderline
GbarA10G0021690 Flavonoid C4H medium borderline
GbarA13G0003780 Flavonoid C4H medium borderline
GbarA13G0006080 Flavonoid C4H low borderline
GbarA13G0006110 Flavonoid C4H medium borderline
GbarA13G0009250 Flavonoid C4H medium borderline