PlantSME Plant secondary metabolism enzyme database

Gossypium barbadense (gossypium_barbadense)

Imported from atlas release summary for Gossypium barbadense.

4400
Candidate Protein Records
3645
Pathway-Level Records
9305
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1055 21 BAHD (388) View species results
Alkaloid pathway 824 25 7DLGT (140) View species results
Phenylpropanoid pathway 824 12 POD (325) View species results
Flavonoid pathway 411 13 UFGT (256) View species results
Rosmarinic acid pathway 307 7 C4H (123) View species results
Steroid pathway 224 12 CAS (104) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 3759 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 675 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Flavonoid pathway
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Protein/Isoform Record Pathway Family Confidence Status
GbarD02G0002720 Flavonoid C4H medium borderline
GbarD02G0002740 Flavonoid C4H medium borderline
GbarD02G0002750 Flavonoid C4H medium borderline
GbarD02G0002770 Flavonoid C4H medium borderline
GbarD02G0002780 Flavonoid C4H medium borderline
GbarD02G0002790 Flavonoid C4H medium borderline
GbarD02G0002800 Flavonoid C4H medium borderline
GbarD04G0020940 Flavonoid C4H medium borderline
GbarD04G0020950 Flavonoid C4H medium borderline
GbarD06G0021040 Flavonoid C4H low borderline
GbarD07G0020690 Flavonoid C4H medium borderline
GbarD08G0020330 Flavonoid C4H low borderline
GbarD10G0020390 Flavonoid C4H medium borderline
GbarD10G0022710 Flavonoid C4H medium borderline
GbarD13G0003690 Flavonoid C4H medium borderline
GbarD13G0006490 Flavonoid C4H medium borderline
GbarD13G0008810 Flavonoid C4H medium borderline
GbarD13G0008840 Flavonoid C4H medium borderline
GbarD13G0026250 Flavonoid C4H medium borderline
GbarA05G0042350 Flavonoid CHI medium pass
GbarA07G0001960 Flavonoid CHI low borderline
GbarA07G0025360 Flavonoid CHI medium pass
GbarA13G0002160 Flavonoid CHI medium pass
GbarD04G0001400 Flavonoid CHI medium pass
GbarD07G0002080 Flavonoid CHI low borderline
GbarD07G0024760 Flavonoid CHI medium pass
GbarD13G0002140 Flavonoid CHI medium pass
GbarA02G0002700 Flavonoid CHS medium pass
GbarA05G0024110 Flavonoid CHS medium pass
GbarA05G0024120 Flavonoid CHS medium pass
GbarA05G0024130 Flavonoid CHS medium pass
GbarA05G0032780 Flavonoid CHS medium pass
GbarA08G0016430 Flavonoid CHS medium pass
GbarA09G0000010 Flavonoid CHS medium pass
GbarA09G0000020 Flavonoid CHS medium pass
GbarA09G0000080 Flavonoid CHS medium pass
GbarA12G0003870 Flavonoid CHS medium pass
GbarD02G0002950 Flavonoid CHS medium pass
GbarD05G0024190 Flavonoid CHS medium pass
GbarD05G0024320 Flavonoid CHS medium pass
GbarD05G0033030 Flavonoid CHS medium pass
GbarD08G0016560 Flavonoid CHS medium pass
GbarD10G0015680 Flavonoid CHS medium pass
GbarD12G0003170 Flavonoid CHS medium pass
Gbarscaffold1143_obj_A100000260 Flavonoid CHS medium pass
GbarA02G0015180 Flavonoid DFR medium pass
GbarA02G0015640 Flavonoid DFR medium pass
GbarA03G0020880 Flavonoid DFR low borderline
GbarA05G0012060 Flavonoid DFR medium borderline
GbarA05G0027800 Flavonoid DFR medium borderline