PlantSME Plant secondary metabolism enzyme database

Gossypium barbadense (gossypium_barbadense)

Imported from atlas release summary for Gossypium barbadense.

3645
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1055 21 BAHD (388) View species results
Alkaloid pathway 824 25 7DLGT (140) View species results
Phenylpropanoid pathway 824 12 POD (325) View species results
Flavonoid pathway 411 13 UFGT (256) View species results
Rosmarinic acid pathway 307 7 C4H (123) View species results
Steroid pathway 224 12 CAS (104) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 3759 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 675 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Gene Pathway Family Confidence Status
GbarD01G0007570 Alkaloid 7DLGT medium pass
GbarD01G0009720 Alkaloid 7DLGT medium pass
GbarD01G0013830 Alkaloid 7DLGT low borderline
GbarD01G0015060 Alkaloid 7DLGT medium pass
GbarD01G0015890 Alkaloid 7DLGT medium pass
GbarD01G0022030 Alkaloid 7DLGT low borderline
GbarD02G0000680 Alkaloid 7DLGT medium pass
GbarD02G0000690 Alkaloid 7DLGT medium pass
GbarD02G0000700 Alkaloid 7DLGT medium pass
GbarD02G0001430 Alkaloid 7DLGT low borderline
GbarD02G0002110 Alkaloid 7DLGT low borderline
GbarD02G0002120 Alkaloid 7DLGT low borderline
GbarD02G0002130 Alkaloid 7DLGT low borderline
GbarD02G0002140 Alkaloid 7DLGT low borderline
GbarD02G0002150 Alkaloid 7DLGT high pass
GbarD02G0003590 Alkaloid 7DLGT medium pass
GbarD02G0006470 Alkaloid 7DLGT medium pass
GbarD02G0006480 Alkaloid 7DLGT low borderline
GbarD02G0006490 Alkaloid 7DLGT medium pass
GbarD02G0022670 Alkaloid 7DLGT low borderline
GbarD02G0022680 Alkaloid 7DLGT low borderline
GbarD02G0022690 Alkaloid 7DLGT low borderline
GbarD03G0001630 Alkaloid 7DLGT low borderline
GbarD03G0003870 Alkaloid 7DLGT medium pass
GbarD03G0003880 Alkaloid 7DLGT medium pass
GbarD03G0003900 Alkaloid 7DLGT medium pass
GbarD03G0003920 Alkaloid 7DLGT medium pass
GbarD03G0004790 Alkaloid 7DLGT low borderline
GbarD03G0005210 Alkaloid 7DLGT low borderline
GbarD03G0008940 Alkaloid 7DLGT medium pass
GbarD03G0011250 Alkaloid 7DLGT low borderline
GbarD03G0011260 Alkaloid 7DLGT low borderline
GbarD03G0013280 Alkaloid 7DLGT medium pass
GbarD03G0015660 Alkaloid 7DLGT medium pass
GbarD04G0000920 Alkaloid 7DLGT low borderline
GbarD04G0000930 Alkaloid 7DLGT low borderline
GbarD04G0004490 Alkaloid 7DLGT medium pass
GbarD04G0004670 Alkaloid 7DLGT low borderline
GbarD04G0006880 Alkaloid 7DLGT high pass
GbarD04G0011920 Alkaloid 7DLGT medium pass
GbarD04G0011940 Alkaloid 7DLGT medium pass
GbarD04G0011950 Alkaloid 7DLGT medium pass
GbarD04G0017820 Alkaloid 7DLGT low borderline
GbarD04G0020910 Alkaloid 7DLGT low borderline
GbarD04G0020920 Alkaloid 7DLGT medium pass
GbarD05G0003180 Alkaloid 7DLGT medium pass
GbarD05G0003190 Alkaloid 7DLGT low borderline
GbarD05G0003200 Alkaloid 7DLGT low borderline
GbarD05G0003210 Alkaloid 7DLGT low borderline
GbarD05G0003290 Alkaloid 7DLGT low borderline