PlantSME Plant secondary metabolism enzyme database

Gossypium barbadense (gossypium_barbadense)

Imported from atlas release summary for Gossypium barbadense.

3645
Candidate Genes
106
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1055 21 BAHD (388) View species results
Alkaloid pathway 824 25 7DLGT (140) View species results
Phenylpropanoid pathway 824 12 POD (325) View species results
Flavonoid pathway 411 13 UFGT (256) View species results
Rosmarinic acid pathway 307 7 C4H (123) View species results
Steroid pathway 224 12 CAS (104) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 24 3759 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 675 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Alkaloid pathway
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Gene Pathway Family Confidence Status
GbarD05G0004910 Alkaloid 7DLGT low borderline
GbarD05G0006890 Alkaloid 7DLGT low borderline
GbarD05G0006900 Alkaloid 7DLGT medium pass
GbarD05G0010880 Alkaloid 7DLGT medium pass
GbarD05G0022780 Alkaloid 7DLGT high pass
GbarD05G0031010 Alkaloid 7DLGT medium pass
GbarD05G0031710 Alkaloid 7DLGT medium pass
GbarD05G0033570 Alkaloid 7DLGT medium pass
GbarD05G0039190 Alkaloid 7DLGT low borderline
GbarD05G0040350 Alkaloid 7DLGT high pass
GbarD06G0001890 Alkaloid 7DLGT medium pass
GbarD06G0003030 Alkaloid 7DLGT low borderline
GbarD06G0005760 Alkaloid 7DLGT low borderline
GbarD06G0022050 Alkaloid 7DLGT low borderline
GbarD06G0023260 Alkaloid 7DLGT low borderline
GbarD06G0023290 Alkaloid 7DLGT low borderline
GbarD07G0008110 Alkaloid 7DLGT low borderline
GbarD07G0009770 Alkaloid 7DLGT low borderline
GbarD07G0010910 Alkaloid 7DLGT medium pass
GbarD07G0010960 Alkaloid 7DLGT high pass
GbarD07G0010970 Alkaloid 7DLGT high pass
GbarD07G0010990 Alkaloid 7DLGT high pass
GbarD07G0011630 Alkaloid 7DLGT medium pass
GbarD07G0015070 Alkaloid 7DLGT low borderline
GbarD07G0020370 Alkaloid 7DLGT medium pass
GbarD07G0020420 Alkaloid 7DLGT medium pass
GbarD07G0020430 Alkaloid 7DLGT medium pass
GbarD07G0021550 Alkaloid 7DLGT low borderline
GbarD07G0021570 Alkaloid 7DLGT low borderline
GbarD07G0024360 Alkaloid 7DLGT low borderline
GbarD07G0024670 Alkaloid 7DLGT low borderline
GbarD08G0004000 Alkaloid 7DLGT low borderline
GbarD08G0008390 Alkaloid 7DLGT low borderline
GbarD08G0009420 Alkaloid 7DLGT medium pass
GbarD09G0001030 Alkaloid 7DLGT low borderline
GbarD09G0015560 Alkaloid 7DLGT low borderline
GbarD09G0015570 Alkaloid 7DLGT medium pass
GbarD09G0022060 Alkaloid 7DLGT low borderline
GbarD09G0022070 Alkaloid 7DLGT low borderline
GbarD09G0022080 Alkaloid 7DLGT low borderline
GbarD09G0022100 Alkaloid 7DLGT low borderline
GbarD10G0012990 Alkaloid 7DLGT medium pass
GbarD10G0017450 Alkaloid 7DLGT medium pass
GbarD10G0020030 Alkaloid 7DLGT low borderline
GbarD10G0020040 Alkaloid 7DLGT low borderline
GbarD10G0026270 Alkaloid 7DLGT medium pass
GbarD10G0026330 Alkaloid 7DLGT medium pass
GbarD10G0026340 Alkaloid 7DLGT medium pass
GbarD10G0026350 Alkaloid 7DLGT medium pass
GbarD10G0026360 Alkaloid 7DLGT medium pass