PlantSME Plant secondary metabolism enzyme database

Gossypium barbadense (gossypium_barbadense)

Imported from atlas release summary for Gossypium barbadense.

4400
Candidate Protein Records
3645
Pathway-Level Records
9305
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1055 21 BAHD (388) View species results
Alkaloid pathway 824 25 7DLGT (140) View species results
Phenylpropanoid pathway 824 12 POD (325) View species results
Flavonoid pathway 411 13 UFGT (256) View species results
Rosmarinic acid pathway 307 7 C4H (123) View species results
Steroid pathway 224 12 CAS (104) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 3759 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 675 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Protein/Isoform Record Pathway Family Confidence Status
GbarA05G0037390 Rosmarinic Acid C4H low borderline
GbarA05G0039890 Rosmarinic Acid C4H low borderline
GbarA05G0041570 Rosmarinic Acid C4H low borderline
GbarA05G0042530 Rosmarinic Acid C4H low borderline
GbarA06G0000750 Rosmarinic Acid C4H low borderline
GbarA06G0001330 Rosmarinic Acid C4H low borderline
GbarA06G0001340 Rosmarinic Acid C4H low borderline
GbarA06G0001350 Rosmarinic Acid C4H low borderline
GbarA06G0001360 Rosmarinic Acid C4H low borderline
GbarA06G0001370 Rosmarinic Acid C4H low borderline
GbarA06G0001380 Rosmarinic Acid C4H low borderline
GbarA06G0001390 Rosmarinic Acid C4H low borderline
GbarA06G0001400 Rosmarinic Acid C4H medium pass
GbarA06G0001410 Rosmarinic Acid C4H low borderline
GbarA06G0001420 Rosmarinic Acid C4H low borderline
GbarA06G0001470 Rosmarinic Acid C4H low borderline
GbarA06G0002270 Rosmarinic Acid C4H low borderline
GbarA06G0006270 Rosmarinic Acid C4H low borderline
GbarA06G0008390 Rosmarinic Acid C4H medium pass
GbarA06G0012840 Rosmarinic Acid C4H low borderline
GbarA06G0017170 Rosmarinic Acid C4H low borderline
GbarA06G0018250 Rosmarinic Acid C4H low borderline
GbarA06G0018900 Rosmarinic Acid C4H low borderline
GbarA06G0020360 Rosmarinic Acid C4H low borderline
GbarA06G0020640 Rosmarinic Acid C4H low borderline
GbarA06G0023330 Rosmarinic Acid C4H low borderline
GbarA06G0023340 Rosmarinic Acid C4H low borderline
GbarA07G0000230 Rosmarinic Acid C4H low borderline
GbarA07G0004590 Rosmarinic Acid C4H low borderline
GbarA07G0006230 Rosmarinic Acid C4H low borderline
GbarA07G0006250 Rosmarinic Acid C4H low borderline
GbarA07G0006270 Rosmarinic Acid C4H low borderline
GbarA07G0008630 Rosmarinic Acid C4H low borderline
GbarA07G0008660 Rosmarinic Acid C4H medium pass
GbarA07G0008780 Rosmarinic Acid C4H low borderline
GbarA07G0010200 Rosmarinic Acid C4H low borderline
GbarA07G0010210 Rosmarinic Acid C4H low borderline
GbarA07G0010890 Rosmarinic Acid C4H low borderline
GbarA07G0013180 Rosmarinic Acid C4H medium pass
GbarA07G0017300 Rosmarinic Acid C4H low borderline
GbarA07G0020120 Rosmarinic Acid C4H low borderline
GbarA07G0020500 Rosmarinic Acid C4H low borderline
GbarA07G0021910 Rosmarinic Acid C4H low borderline
GbarA07G0021920 Rosmarinic Acid C4H low borderline
GbarA07G0021930 Rosmarinic Acid C4H low borderline
GbarA07G0023290 Rosmarinic Acid C4H low borderline
GbarA08G0012720 Rosmarinic Acid C4H low borderline
GbarA08G0014910 Rosmarinic Acid C4H low borderline
GbarA08G0015410 Rosmarinic Acid C4H low borderline
GbarA08G0017460 Rosmarinic Acid C4H low borderline