PlantSME Plant secondary metabolism enzyme database

Gossypium barbadense (gossypium_barbadense)

Imported from atlas release summary for Gossypium barbadense.

4400
Candidate Protein Records
3645
Pathway-Level Records
9305
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1055 21 BAHD (388) View species results
Alkaloid pathway 824 25 7DLGT (140) View species results
Phenylpropanoid pathway 824 12 POD (325) View species results
Flavonoid pathway 411 13 UFGT (256) View species results
Rosmarinic acid pathway 307 7 C4H (123) View species results
Steroid pathway 224 12 CAS (104) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 3759 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 675 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Protein/Isoform Record Pathway Family Confidence Status
GbarA03G0001940 Rosmarinic Acid C4H low borderline
GbarA03G0001950 Rosmarinic Acid C4H low borderline
GbarA03G0001970 Rosmarinic Acid C4H low borderline
GbarA03G0001980 Rosmarinic Acid C4H low borderline
GbarA03G0005600 Rosmarinic Acid C4H low borderline
GbarA03G0008940 Rosmarinic Acid C4H low borderline
GbarA03G0008970 Rosmarinic Acid C4H low borderline
GbarA03G0012330 Rosmarinic Acid C4H low borderline
GbarA04G0001870 Rosmarinic Acid C4H low borderline
GbarA04G0001900 Rosmarinic Acid C4H low borderline
GbarA04G0001920 Rosmarinic Acid C4H low borderline
GbarA04G0005230 Rosmarinic Acid C4H medium pass
GbarA04G0005240 Rosmarinic Acid C4H medium pass
GbarA04G0005250 Rosmarinic Acid C4H medium pass
GbarA04G0005260 Rosmarinic Acid C4H medium pass
GbarA04G0008480 Rosmarinic Acid C4H low borderline
GbarA04G0008490 Rosmarinic Acid C4H low borderline
GbarA04G0015670 Rosmarinic Acid C4H low borderline
GbarA04G0015680 Rosmarinic Acid C4H low borderline
GbarA04G0016830 Rosmarinic Acid C4H low borderline
GbarA04G0017450 Rosmarinic Acid C4H low borderline
GbarA04G0017460 Rosmarinic Acid C4H low borderline
GbarA05G0001930 Rosmarinic Acid C4H low borderline
GbarA05G0004200 Rosmarinic Acid C4H low borderline
GbarA05G0006460 Rosmarinic Acid C4H low borderline
GbarA05G0006910 Rosmarinic Acid C4H low borderline
GbarA05G0008410 Rosmarinic Acid C4H low borderline
GbarA05G0009810 Rosmarinic Acid C4H low borderline
GbarA05G0011040 Rosmarinic Acid C4H low borderline
GbarA05G0013640 Rosmarinic Acid C4H low borderline
GbarA05G0015010 Rosmarinic Acid C4H low borderline
GbarA05G0018780 Rosmarinic Acid C4H low borderline
GbarA05G0019520 Rosmarinic Acid C4H low borderline
GbarA05G0019530 Rosmarinic Acid C4H low borderline
GbarA05G0019760 Rosmarinic Acid C4H low borderline
GbarA05G0019770 Rosmarinic Acid C4H low borderline
GbarA05G0019780 Rosmarinic Acid C4H low borderline
GbarA05G0019810 Rosmarinic Acid C4H low borderline
GbarA05G0019820 Rosmarinic Acid C4H low borderline
GbarA05G0019830 Rosmarinic Acid C4H low borderline
GbarA05G0019900 Rosmarinic Acid C4H low borderline
GbarA05G0020320 Rosmarinic Acid C4H low borderline
GbarA05G0020760 Rosmarinic Acid C4H low borderline
GbarA05G0020770 Rosmarinic Acid C4H medium pass
GbarA05G0020820 Rosmarinic Acid C4H low borderline
GbarA05G0026400 Rosmarinic Acid C4H low borderline
GbarA05G0028060 Rosmarinic Acid C4H low borderline
GbarA05G0029610 Rosmarinic Acid C4H medium pass
GbarA05G0029630 Rosmarinic Acid C4H low borderline
GbarA05G0031940 Rosmarinic Acid C4H low borderline