PlantSME Plant secondary metabolism enzyme database

Gossypium barbadense (gossypium_barbadense)

Imported from atlas release summary for Gossypium barbadense.

4400
Candidate Protein Records
3645
Pathway-Level Records
9305
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1055 21 BAHD (388) View species results
Alkaloid pathway 824 25 7DLGT (140) View species results
Phenylpropanoid pathway 824 12 POD (325) View species results
Flavonoid pathway 411 13 UFGT (256) View species results
Rosmarinic acid pathway 307 7 C4H (123) View species results
Steroid pathway 224 12 CAS (104) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 3759 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 675 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Protein/Isoform Record Pathway Family Confidence Status
GbarA10G0021150 Rosmarinic Acid C4H low borderline
GbarA10G0021690 Rosmarinic Acid C4H low borderline
GbarA10G0021820 Rosmarinic Acid C4H low borderline
GbarA10G0021850 Rosmarinic Acid C4H low borderline
GbarA10G0021860 Rosmarinic Acid C4H low borderline
GbarA10G0021870 Rosmarinic Acid C4H low borderline
GbarA10G0023680 Rosmarinic Acid C4H low borderline
GbarA10G0026030 Rosmarinic Acid C4H low borderline
GbarA10G0026180 Rosmarinic Acid C4H low borderline
GbarA11G0000720 Rosmarinic Acid C4H low borderline
GbarA11G0000730 Rosmarinic Acid C4H medium pass
GbarA11G0000740 Rosmarinic Acid C4H medium pass
GbarA11G0000750 Rosmarinic Acid C4H low borderline
GbarA11G0003780 Rosmarinic Acid C4H low borderline
GbarA11G0004570 Rosmarinic Acid C4H medium pass
GbarA11G0008480 Rosmarinic Acid C4H low borderline
GbarA11G0008490 Rosmarinic Acid C4H low borderline
GbarA11G0008500 Rosmarinic Acid C4H low borderline
GbarA11G0010390 Rosmarinic Acid C4H low borderline
GbarA11G0014020 Rosmarinic Acid C4H medium pass
GbarA11G0014680 Rosmarinic Acid C4H low borderline
GbarA11G0015410 Rosmarinic Acid C4H low borderline
GbarA11G0017000 Rosmarinic Acid C4H low borderline
GbarA11G0018700 Rosmarinic Acid C4H medium pass
GbarA11G0018820 Rosmarinic Acid C4H low borderline
GbarA11G0019260 Rosmarinic Acid C4H low borderline
GbarA11G0019690 Rosmarinic Acid C4H medium pass
GbarA11G0019700 Rosmarinic Acid C4H low borderline
GbarA11G0019710 Rosmarinic Acid C4H low borderline
GbarA11G0023360 Rosmarinic Acid C4H medium pass
GbarA11G0024780 Rosmarinic Acid C4H medium pass
GbarA11G0034490 Rosmarinic Acid C4H low borderline
GbarA11G0034500 Rosmarinic Acid C4H low borderline
GbarA11G0034510 Rosmarinic Acid C4H low borderline
GbarA11G0036790 Rosmarinic Acid C4H medium pass
GbarA11G0036870 Rosmarinic Acid C4H low borderline
GbarA12G0002790 Rosmarinic Acid C4H low borderline
GbarA12G0005340 Rosmarinic Acid C4H low borderline
GbarA12G0005620 Rosmarinic Acid C4H medium pass
GbarA12G0006290 Rosmarinic Acid C4H low borderline
GbarA12G0007980 Rosmarinic Acid C4H low borderline
GbarA12G0008000 Rosmarinic Acid C4H medium pass
GbarA12G0009650 Rosmarinic Acid C4H low borderline
GbarA12G0011470 Rosmarinic Acid C4H low borderline
GbarA12G0012890 Rosmarinic Acid C4H low borderline
GbarA12G0013050 Rosmarinic Acid C4H low borderline
GbarA12G0015810 Rosmarinic Acid C4H low borderline
GbarA12G0016500 Rosmarinic Acid C4H low borderline
GbarA12G0017960 Rosmarinic Acid C4H low borderline
GbarA12G0018350 Rosmarinic Acid C4H low borderline