PlantSME Plant secondary metabolism enzyme database

Gossypium barbadense (gossypium_barbadense)

Imported from atlas release summary for Gossypium barbadense.

4400
Candidate Protein Records
3645
Pathway-Level Records
9305
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1055 21 BAHD (388) View species results
Alkaloid pathway 824 25 7DLGT (140) View species results
Phenylpropanoid pathway 824 12 POD (325) View species results
Flavonoid pathway 411 13 UFGT (256) View species results
Rosmarinic acid pathway 307 7 C4H (123) View species results
Steroid pathway 224 12 CAS (104) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 3759 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 675 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Rosmarinic acid pathway
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Protein/Isoform Record Pathway Family Confidence Status
GbarA12G0020120 Rosmarinic Acid C4H low borderline
GbarA12G0020490 Rosmarinic Acid C4H low borderline
GbarA12G0020500 Rosmarinic Acid C4H low borderline
GbarA12G0020510 Rosmarinic Acid C4H low borderline
GbarA12G0020990 Rosmarinic Acid C4H low borderline
GbarA12G0022130 Rosmarinic Acid C4H low borderline
GbarA12G0022450 Rosmarinic Acid C4H medium pass
GbarA12G0022460 Rosmarinic Acid C4H low borderline
GbarA12G0024130 Rosmarinic Acid C4H low borderline
GbarA12G0025950 Rosmarinic Acid C4H low borderline
GbarA12G0027700 Rosmarinic Acid C4H low borderline
GbarA12G0028450 Rosmarinic Acid C4H low borderline
GbarA12G0028460 Rosmarinic Acid C4H low borderline
GbarA12G0028470 Rosmarinic Acid C4H low borderline
GbarA13G0000110 Rosmarinic Acid C4H medium pass
GbarA13G0001260 Rosmarinic Acid C4H low borderline
GbarA13G0001700 Rosmarinic Acid C4H low borderline
GbarA13G0002350 Rosmarinic Acid C4H medium pass
GbarA13G0002370 Rosmarinic Acid C4H medium pass
GbarA13G0002980 Rosmarinic Acid C4H medium pass
GbarA13G0003780 Rosmarinic Acid C4H low borderline
GbarA13G0003790 Rosmarinic Acid C4H low borderline
GbarA13G0006080 Rosmarinic Acid C4H low borderline
GbarA13G0006110 Rosmarinic Acid C4H low borderline
GbarA13G0008610 Rosmarinic Acid C4H low borderline
GbarA13G0008670 Rosmarinic Acid C4H low borderline
GbarA13G0009250 Rosmarinic Acid C4H low borderline
GbarA13G0011280 Rosmarinic Acid C4H low borderline
GbarA13G0014280 Rosmarinic Acid C4H low borderline
GbarA13G0014450 Rosmarinic Acid C4H low borderline
GbarA13G0014500 Rosmarinic Acid C4H low borderline
GbarA13G0015660 Rosmarinic Acid C4H low borderline
GbarA13G0015760 Rosmarinic Acid C4H low borderline
GbarA13G0018190 Rosmarinic Acid C4H low borderline
GbarA13G0018240 Rosmarinic Acid C4H low borderline
GbarA13G0022760 Rosmarinic Acid C4H medium pass
GbarA13G0026350 Rosmarinic Acid C4H medium pass
GbarD01G0003900 Rosmarinic Acid C4H low borderline
GbarD01G0003910 Rosmarinic Acid C4H low borderline
GbarD01G0006170 Rosmarinic Acid C4H medium pass
GbarD01G0007680 Rosmarinic Acid C4H low borderline
GbarD01G0008580 Rosmarinic Acid C4H low borderline
GbarD01G0008590 Rosmarinic Acid C4H low borderline
GbarD01G0008600 Rosmarinic Acid C4H low borderline
GbarD01G0008610 Rosmarinic Acid C4H medium pass
GbarD01G0008620 Rosmarinic Acid C4H low borderline
GbarD01G0008650 Rosmarinic Acid C4H low borderline
GbarD01G0008690 Rosmarinic Acid C4H low borderline
GbarD01G0008710 Rosmarinic Acid C4H medium pass
GbarD01G0008720 Rosmarinic Acid C4H low borderline