PlantSME Plant secondary metabolism enzyme database

Gossypium barbadense (gossypium_barbadense)

Imported from atlas release summary for Gossypium barbadense.

4400
Candidate Protein Records
3645
Pathway-Level Records
9305
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1055 21 BAHD (388) View species results
Alkaloid pathway 824 25 7DLGT (140) View species results
Phenylpropanoid pathway 824 12 POD (325) View species results
Flavonoid pathway 411 13 UFGT (256) View species results
Rosmarinic acid pathway 307 7 C4H (123) View species results
Steroid pathway 224 12 CAS (104) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 3759 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 675 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Protein/Isoform Record Pathway Family Confidence Status
GbarD06G0012200 Steroid CAS medium pass
GbarD06G0016240 Steroid CAS low borderline
GbarD06G0021500 Steroid CAS medium pass
GbarD06G0021510 Steroid CAS medium pass
GbarD07G0006380 Steroid CAS medium pass
GbarD08G0002100 Steroid CAS medium pass
GbarD08G0007240 Steroid CAS medium pass
GbarD08G0011450 Steroid CAS low borderline
GbarD08G0024200 Steroid CAS medium pass
GbarD09G0000900 Steroid CAS medium pass
GbarD09G0003610 Steroid CAS medium pass
GbarD09G0003620 Steroid CAS medium pass
GbarD09G0003650 Steroid CAS medium pass
GbarD09G0003660 Steroid CAS medium pass
GbarD09G0003670 Steroid CAS medium pass
GbarD09G0022440 Steroid CAS medium pass
GbarD09G0023100 Steroid CAS medium pass
GbarD10G0000530 Steroid CAS low borderline
GbarD10G0000540 Steroid CAS low borderline
GbarD10G0000550 Steroid CAS low borderline
GbarD10G0000580 Steroid CAS low borderline
GbarD10G0001780 Steroid CAS medium pass
GbarD10G0001830 Steroid CAS medium pass
GbarD10G0001840 Steroid CAS low borderline
GbarD10G0004450 Steroid CAS medium pass
GbarD10G0018230 Steroid CAS medium pass
GbarD10G0022230 Steroid CAS medium pass
GbarD11G0009630 Steroid CAS medium pass
GbarD11G0009640 Steroid CAS medium pass
GbarD11G0013110 Steroid CAS medium pass
GbarD11G0031770 Steroid CAS medium pass
GbarD11G0031830 Steroid CAS low borderline
GbarD11G0034050 Steroid CAS low borderline
GbarD13G0011000 Steroid CAS medium pass
GbarD13G0011910 Steroid CAS medium pass
GbarD13G0013920 Steroid CAS medium pass
GbarD13G0013960 Steroid CAS medium pass
GbarD13G0016250 Steroid CAS medium pass
GbarD13G0016260 Steroid CAS medium pass
GbarD13G0019520 Steroid CAS medium pass
GbarD13G0019540 Steroid CAS medium pass
GbarD13G0023470 Steroid CAS medium pass
Gbarscaffold418_obj0004860 Steroid CAS medium pass
GbarA03G0001830 Steroid CPD/CYP90A1 low borderline
GbarA04G0008480 Steroid CPD/CYP90A1 medium borderline
GbarA05G0035490 Steroid CPD/CYP90A1 low borderline
GbarA05G0041710 Steroid CPD/CYP90A1 low borderline
GbarA06G0001330 Steroid CPD/CYP90A1 low borderline
GbarA06G0001350 Steroid CPD/CYP90A1 low borderline
GbarA06G0001360 Steroid CPD/CYP90A1 low borderline