PlantSME Plant secondary metabolism enzyme database

Gossypium barbadense (gossypium_barbadense)

Imported from atlas release summary for Gossypium barbadense.

4400
Candidate Protein Records
3645
Pathway-Level Records
9305
Family-Level Calls
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and protein/isoform records for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
  • Download candidate protein FASTA for this species
Family Distribution
More Families (98)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Pathway-Level Records Detected Families Top family Results
Terpenoid pathway 1055 21 BAHD (388) View species results
Alkaloid pathway 824 25 7DLGT (140) View species results
Phenylpropanoid pathway 824 12 POD (325) View species results
Flavonoid pathway 411 13 UFGT (256) View species results
Rosmarinic acid pathway 307 7 C4H (123) View species results
Steroid pathway 224 12 CAS (104) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Detected families Assignment calls Included families
P450/oxygenase 24 3759 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP80F1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 675 BAHD, HCT, RAS
Identification Result List
Search the public protein/isoform identification results for this species; click pathway or family legends above to narrow within this species.
Current pathway filter: Steroid pathway
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Protein/Isoform Record Pathway Family Confidence Status
GbarA06G0001380 Steroid CPD/CYP90A1 low borderline
GbarA06G0001400 Steroid CPD/CYP90A1 low borderline
GbarA06G0022220 Steroid CPD/CYP90A1 low borderline
GbarA07G0017300 Steroid CPD/CYP90A1 low borderline
GbarA07G0023130 Steroid CPD/CYP90A1 low borderline
GbarA09G0020970 Steroid CPD/CYP90A1 medium borderline
GbarA09G0020980 Steroid CPD/CYP90A1 medium borderline
GbarA09G0022330 Steroid CPD/CYP90A1 medium borderline
GbarA10G0021090 Steroid CPD/CYP90A1 medium borderline
GbarA10G0021340 Steroid CPD/CYP90A1 low borderline
GbarA11G0003890 Steroid CPD/CYP90A1 low borderline
GbarA11G0020660 Steroid CPD/CYP90A1 low borderline
GbarA11G0023560 Steroid CPD/CYP90A1 low borderline
GbarA11G0036870 Steroid CPD/CYP90A1 medium borderline
GbarA12G0002400 Steroid CPD/CYP90A1 low borderline
GbarA12G0006290 Steroid CPD/CYP90A1 medium borderline
GbarA12G0022450 Steroid CPD/CYP90A1 medium borderline
GbarD02G0002760 Steroid CPD/CYP90A1 low borderline
GbarD03G0017740 Steroid CPD/CYP90A1 medium borderline
GbarD03G0017860 Steroid CPD/CYP90A1 low borderline
GbarD04G0007980 Steroid CPD/CYP90A1 low borderline
GbarD06G0001170 Steroid CPD/CYP90A1 low borderline
GbarD06G0001190 Steroid CPD/CYP90A1 low borderline
GbarD06G0001230 Steroid CPD/CYP90A1 low borderline
GbarD06G0001240 Steroid CPD/CYP90A1 low borderline
GbarD06G0022550 Steroid CPD/CYP90A1 low borderline
GbarD07G0017260 Steroid CPD/CYP90A1 low borderline
GbarD08G0001390 Steroid CPD/CYP90A1 low borderline
GbarD09G0020360 Steroid CPD/CYP90A1 medium borderline
GbarD10G0011300 Steroid CPD/CYP90A1 low borderline
GbarD10G0022470 Steroid CPD/CYP90A1 low borderline
GbarD11G0000770 Steroid CPD/CYP90A1 medium borderline
GbarD11G0004060 Steroid CPD/CYP90A1 low borderline
GbarD11G0014920 Steroid CPD/CYP90A1 low borderline
GbarD11G0023990 Steroid CPD/CYP90A1 low borderline
GbarD11G0024150 Steroid CPD/CYP90A1 low borderline
GbarD11G0037160 Steroid CPD/CYP90A1 medium borderline
GbarD12G0002470 Steroid CPD/CYP90A1 low borderline
GbarD12G0006450 Steroid CPD/CYP90A1 medium borderline
GbarD13G0008000 Steroid CPD/CYP90A1 low borderline
GbarD13G0013310 Steroid CPD/CYP90A1 medium borderline
GbarD13G0013850 Steroid CPD/CYP90A1 medium borderline
Gbarscaffold17368_obj_A060001410 Steroid CPD/CYP90A1 low borderline
GbarA07G0005830 Steroid CPI1 high pass
GbarD05G0011280 Steroid CPI1 low borderline
GbarD07G0005890 Steroid CPI1 high pass
GbarA01G0008480 Steroid CYP51G1 medium borderline
GbarA01G0008520 Steroid CYP51G1 medium borderline
GbarA01G0008540 Steroid CYP51G1 medium borderline
GbarA01G0008550 Steroid CYP51G1 medium borderline