PlantSME Plant secondary metabolism enzyme database

Hibiscus hamabo (hibiscus_hamabo)

Imported from atlas release summary for Hibiscus hamabo.

4039
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1160 21 BAHD (466) View species results
Phenylpropanoid pathway 967 13 POD (369) View species results
Alkaloid pathway 814 27 NMT (125) View species results
Flavonoid pathway 465 14 UFGT (231) View species results
Rosmarinic acid pathway 372 7 C4H (135) View species results
Steroid pathway 261 15 CAS (118) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 4033 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 776 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: 4CL
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Gene Pathway Family Confidence Status Best Target
HhamSuperscaffold250450270 Flavonoid 4CL low borderline 4CL__00014__sp_Q84P24_4CLL6_ARATH
HhamSuperscaffold260466090 Flavonoid 4CL low borderline 4CL__00019__sp_Q9SMT7_4CLLA_ARATH
HhamSuperscaffold260473510 Flavonoid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
HhamSuperscaffold270481050 Flavonoid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
HhamSuperscaffold270483820 Flavonoid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
HhamSuperscaffold270488940 Flavonoid 4CL medium pass 4CL__00012__sp_Q84P21_4CLL5_ARATH
HhamSuperscaffold270488960 Flavonoid 4CL medium pass 4CL__00012__sp_Q84P21_4CLL5_ARATH
HhamSuperscaffold270488970 Flavonoid 4CL medium pass 4CL__00012__sp_Q84P21_4CLL5_ARATH
HhamSuperscaffold280505900 Flavonoid 4CL low borderline 4CL__00015__sp_Q9LU36_4CL4_ARATH
HhamSuperscaffold290514400 Flavonoid 4CL medium pass 4CL__00004__sp_O24146_4CL2_TOBAC
HhamSuperscaffold290524750 Flavonoid 4CL medium pass 4CL__00013__sp_Q84P23_4CLL9_ARATH
HhamSuperscaffold300596770 Flavonoid 4CL low borderline 4CL__00007__sp_Q42524_4CL1_ARATH
HhamSuperscaffold30548300 Flavonoid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
HhamSuperscaffold30568900 Flavonoid 4CL medium pass 4CL__00012__sp_Q84P21_4CLL5_ARATH
HhamSuperscaffold30580860 Flavonoid 4CL medium pass 4CL__00014__sp_Q84P24_4CLL6_ARATH
HhamSuperscaffold310617400 Flavonoid 4CL low borderline 4CL__00002__sp_I3PB37_4CL1_PETHY
HhamSuperscaffold320622410 Flavonoid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
HhamSuperscaffold330637230 Flavonoid 4CL low borderline 4CL__00016__sp_Q9M0X9_4CLL7_ARATH
HhamSuperscaffold330642310 Flavonoid 4CL medium pass 4CL__00012__sp_Q84P21_4CLL5_ARATH
HhamSuperscaffold330645490 Flavonoid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
HhamSuperscaffold330647140 Flavonoid 4CL medium pass 4CL__00012__sp_Q84P21_4CLL5_ARATH
HhamSuperscaffold340659310 Flavonoid 4CL low borderline 4CL__00014__sp_Q84P24_4CLL6_ARATH
HhamSuperscaffold350682220 Flavonoid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
HhamSuperscaffold360684350 Flavonoid 4CL low borderline 4CL__00005__sp_P0C5B6_4CLL4_ARATH
HhamSuperscaffold360693570 Flavonoid 4CL low borderline 4CL__00007__sp_Q42524_4CL1_ARATH
HhamSuperscaffold360696160 Flavonoid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
HhamSuperscaffold360696220 Flavonoid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
HhamSuperscaffold370707510 Flavonoid 4CL medium pass 4CL__00016__sp_Q9M0X9_4CLL7_ARATH
HhamSuperscaffold380716630 Flavonoid 4CL low borderline 4CL__00007__sp_Q42524_4CL1_ARATH
HhamSuperscaffold380727760 Flavonoid 4CL medium pass 4CL__00012__sp_Q84P21_4CLL5_ARATH
HhamSuperscaffold390735150 Flavonoid 4CL low borderline 4CL__00012__sp_Q84P21_4CLL5_ARATH
HhamSuperscaffold390739100 Flavonoid 4CL low borderline 4CL__00015__sp_Q9LU36_4CL4_ARATH
HhamSuperscaffold390743730 Flavonoid 4CL medium pass 4CL__00007__sp_Q42524_4CL1_ARATH
HhamSuperscaffold390746400 Flavonoid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
HhamSuperscaffold400793190 Flavonoid 4CL low borderline 4CL__00014__sp_Q84P24_4CLL6_ARATH
HhamSuperscaffold400795800 Flavonoid 4CL medium pass 4CL__00014__sp_Q84P24_4CLL6_ARATH
HhamSuperscaffold400800300 Flavonoid 4CL medium pass 4CL__00013__sp_Q84P23_4CLL9_ARATH
HhamSuperscaffold400800310 Flavonoid 4CL medium pass 4CL__00013__sp_Q84P23_4CLL9_ARATH
HhamSuperscaffold400800330 Flavonoid 4CL medium pass 4CL__00013__sp_Q84P23_4CLL9_ARATH
HhamSuperscaffold400800340 Flavonoid 4CL medium pass 4CL__00013__sp_Q84P23_4CLL9_ARATH
HhamSuperscaffold40750590 Flavonoid 4CL medium pass 4CL__00013__sp_Q84P23_4CLL9_ARATH
HhamSuperscaffold40753730 Flavonoid 4CL low borderline 4CL__00018__sp_Q9S777_4CL3_ARATH
HhamSuperscaffold40759710 Flavonoid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
HhamSuperscaffold40773290 Flavonoid 4CL medium pass 4CL__00013__sp_Q84P23_4CLL9_ARATH
HhamSuperscaffold40778260 Flavonoid 4CL medium pass 4CL__00018__sp_Q9S777_4CL3_ARATH
HhamSuperscaffold40782830 Flavonoid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
HhamSuperscaffold410813050 Flavonoid 4CL medium pass 4CL__00001__sp_I3PB36_CNL_PETHY
HhamSuperscaffold440851010 Flavonoid 4CL medium pass 4CL__00004__sp_O24146_4CL2_TOBAC
HhamSuperscaffold440852160 Flavonoid 4CL low borderline 4CL__00019__sp_Q9SMT7_4CLLA_ARATH
HhamSuperscaffold440856750 Flavonoid 4CL low borderline 4CL__00011__sp_Q6ZAC1_4CL5_ORYSJ