PlantSME Plant secondary metabolism enzyme database

Hibiscus hamabo (hibiscus_hamabo)

Imported from atlas release summary for Hibiscus hamabo.

4039
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1160 21 BAHD (466) View species results
Phenylpropanoid pathway 967 13 POD (369) View species results
Alkaloid pathway 814 27 NMT (125) View species results
Flavonoid pathway 465 14 UFGT (231) View species results
Rosmarinic acid pathway 372 7 C4H (135) View species results
Steroid pathway 261 15 CAS (118) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 4033 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 776 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: 8HGO
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Gene Pathway Family Confidence Status
HhamSuperscaffold160210560 Alkaloid 8HGO medium borderline
HhamSuperscaffold170224230 Alkaloid 8HGO medium borderline
HhamSuperscaffold20293560 Alkaloid 8HGO medium borderline
HhamSuperscaffold20293570 Alkaloid 8HGO medium borderline
HhamSuperscaffold20293740 Alkaloid 8HGO medium borderline
HhamSuperscaffold20304690 Alkaloid 8HGO medium borderline
HhamSuperscaffold20324940 Alkaloid 8HGO medium borderline
HhamSuperscaffold210369060 Alkaloid 8HGO medium borderline
HhamSuperscaffold220372860 Alkaloid 8HGO medium borderline
HhamSuperscaffold250442270 Alkaloid 8HGO medium borderline
HhamSuperscaffold300590510 Alkaloid 8HGO medium pass
HhamSuperscaffold300591980 Alkaloid 8HGO medium borderline
HhamSuperscaffold30540900 Alkaloid 8HGO medium borderline
HhamSuperscaffold30566690 Alkaloid 8HGO medium borderline
HhamSuperscaffold310609460 Alkaloid 8HGO medium borderline
HhamSuperscaffold320629500 Alkaloid 8HGO medium borderline
HhamSuperscaffold330649040 Alkaloid 8HGO medium borderline
HhamSuperscaffold350676820 Alkaloid 8HGO medium borderline
HhamSuperscaffold350676830 Alkaloid 8HGO medium borderline
HhamSuperscaffold380720990 Alkaloid 8HGO medium borderline
HhamSuperscaffold380729200 Alkaloid 8HGO medium borderline
HhamSuperscaffold400798970 Alkaloid 8HGO medium borderline
HhamSuperscaffold40778110 Alkaloid 8HGO medium borderline
HhamSuperscaffold40778120 Alkaloid 8HGO medium borderline
HhamSuperscaffold40778130 Alkaloid 8HGO medium borderline
HhamSuperscaffold40778140 Alkaloid 8HGO medium borderline
HhamSuperscaffold40778150 Alkaloid 8HGO medium borderline
HhamSuperscaffold430834070 Alkaloid 8HGO medium pass
HhamSuperscaffold430834080 Alkaloid 8HGO low borderline
HhamSuperscaffold430834100 Alkaloid 8HGO medium borderline
HhamSuperscaffold430834350 Alkaloid 8HGO medium borderline
HhamSuperscaffold430839750 Alkaloid 8HGO medium borderline
HhamSuperscaffold70967810 Alkaloid 8HGO medium borderline
HhamSuperscaffold70972710 Alkaloid 8HGO medium borderline
HhamSuperscaffold70984140 Alkaloid 8HGO low borderline