PlantSME Plant secondary metabolism enzyme database

Hibiscus hamabo (hibiscus_hamabo)

Imported from atlas release summary for Hibiscus hamabo.

4039
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1160 21 BAHD (466) View species results
Phenylpropanoid pathway 967 13 POD (369) View species results
Alkaloid pathway 814 27 NMT (125) View species results
Flavonoid pathway 465 14 UFGT (231) View species results
Rosmarinic acid pathway 372 7 C4H (135) View species results
Steroid pathway 261 15 CAS (118) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 4033 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 776 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: LAC
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Gene Pathway Family Confidence Status Best Target
HhamSuperscaffold10004990 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
HhamSuperscaffold100053430 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
HhamSuperscaffold100053440 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
HhamSuperscaffold100054680 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
HhamSuperscaffold10005890 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
HhamSuperscaffold100060710 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
HhamSuperscaffold100068400 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
HhamSuperscaffold100069780 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
HhamSuperscaffold100071650 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
HhamSuperscaffold100071660 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
HhamSuperscaffold100071740 Phenylpropanoid LAC low borderline LAC__00004__sp_Q9LFD2_LAC8_ARATH
HhamSuperscaffold10017270 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
HhamSuperscaffold10017280 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
HhamSuperscaffold10017580 Phenylpropanoid LAC low borderline LAC__00004__sp_Q9LFD2_LAC8_ARATH
HhamSuperscaffold10019190 Phenylpropanoid LAC low borderline LAC__00001__sp_O80434_LAC4_ARATH
HhamSuperscaffold10019810 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
HhamSuperscaffold10019850 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
HhamSuperscaffold10036310 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
HhamSuperscaffold10036320 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
HhamSuperscaffold110092520 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
HhamSuperscaffold110099060 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
HhamSuperscaffold120111400 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
HhamSuperscaffold120112570 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
HhamSuperscaffold120112580 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
HhamSuperscaffold120112590 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
HhamSuperscaffold120112600 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
HhamSuperscaffold120121640 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
HhamSuperscaffold120121650 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
HhamSuperscaffold130136740 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
HhamSuperscaffold130136780 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
HhamSuperscaffold130139830 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
HhamSuperscaffold130139840 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
HhamSuperscaffold130139850 Phenylpropanoid LAC low borderline LAC__00003__sp_Q84J37_LAC15_ARATH
HhamSuperscaffold130139860 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
HhamSuperscaffold130139870 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
HhamSuperscaffold130139880 Phenylpropanoid LAC medium pass LAC__00003__sp_Q84J37_LAC15_ARATH
HhamSuperscaffold130144030 Phenylpropanoid LAC low borderline LAC__00001__sp_O80434_LAC4_ARATH
HhamSuperscaffold130149250 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
HhamSuperscaffold140161610 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
HhamSuperscaffold150194810 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
HhamSuperscaffold150198070 Phenylpropanoid LAC low borderline LAC__00004__sp_Q9LFD2_LAC8_ARATH
HhamSuperscaffold160206180 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
HhamSuperscaffold160206920 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
HhamSuperscaffold160213590 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
HhamSuperscaffold160213600 Phenylpropanoid LAC medium pass LAC__00002__sp_O81081_LAC2_ARATH
HhamSuperscaffold160214850 Phenylpropanoid LAC low borderline LAC__00002__sp_O81081_LAC2_ARATH
HhamSuperscaffold160215110 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
HhamSuperscaffold170221760 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
HhamSuperscaffold170228580 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH
HhamSuperscaffold170238460 Phenylpropanoid LAC medium pass LAC__00001__sp_O80434_LAC4_ARATH