PlantSME Plant secondary metabolism enzyme database

Hibiscus hamabo (hibiscus_hamabo)

Imported from atlas release summary for Hibiscus hamabo.

4039
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1160 21 BAHD (466) View species results
Phenylpropanoid pathway 967 13 POD (369) View species results
Alkaloid pathway 814 27 NMT (125) View species results
Flavonoid pathway 465 14 UFGT (231) View species results
Rosmarinic acid pathway 372 7 C4H (135) View species results
Steroid pathway 261 15 CAS (118) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 4033 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 776 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: IFR
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Gene Pathway Family Confidence Status
HhamSuperscaffold100053770 Flavonoid IFR low borderline
HhamSuperscaffold10006750 Flavonoid IFR low borderline
HhamSuperscaffold10023110 Flavonoid IFR medium pass
HhamSuperscaffold110076980 Flavonoid IFR low borderline
HhamSuperscaffold110094370 Flavonoid IFR medium pass
HhamSuperscaffold110097980 Flavonoid IFR low borderline
HhamSuperscaffold120115800 Flavonoid IFR medium borderline
HhamSuperscaffold120120780 Flavonoid IFR low borderline
HhamSuperscaffold120124190 Flavonoid IFR low borderline
HhamSuperscaffold130130770 Flavonoid IFR low borderline
HhamSuperscaffold130142690 Flavonoid IFR medium borderline
HhamSuperscaffold130143260 Flavonoid IFR medium pass
HhamSuperscaffold130148460 Flavonoid IFR low borderline
HhamSuperscaffold130151920 Flavonoid IFR low borderline
HhamSuperscaffold140162880 Flavonoid IFR low borderline
HhamSuperscaffold140164340 Flavonoid IFR low borderline
HhamSuperscaffold140177250 Flavonoid IFR low borderline
HhamSuperscaffold150178020 Flavonoid IFR low borderline
HhamSuperscaffold150178350 Flavonoid IFR low borderline
HhamSuperscaffold150183790 Flavonoid IFR low borderline
HhamSuperscaffold150193790 Flavonoid IFR low borderline
HhamSuperscaffold160206890 Flavonoid IFR low borderline
HhamSuperscaffold160216300 Flavonoid IFR low borderline
HhamSuperscaffold170222950 Flavonoid IFR low borderline
HhamSuperscaffold180242580 Flavonoid IFR low borderline
HhamSuperscaffold180247350 Flavonoid IFR low borderline
HhamSuperscaffold180248540 Flavonoid IFR low borderline
HhamSuperscaffold180267980 Flavonoid IFR high pass
HhamSuperscaffold200337450 Flavonoid IFR low borderline
HhamSuperscaffold200340780 Flavonoid IFR medium pass
HhamSuperscaffold20291730 Flavonoid IFR low borderline
HhamSuperscaffold20296190 Flavonoid IFR low borderline
HhamSuperscaffold20329700 Flavonoid IFR high pass
HhamSuperscaffold210356390 Flavonoid IFR low borderline
HhamSuperscaffold210359800 Flavonoid IFR low borderline
HhamSuperscaffold230398950 Flavonoid IFR low borderline
HhamSuperscaffold230403630 Flavonoid IFR high pass
HhamSuperscaffold230413220 Flavonoid IFR high pass
HhamSuperscaffold240417980 Flavonoid IFR high pass
HhamSuperscaffold240425880 Flavonoid IFR low borderline
HhamSuperscaffold240426800 Flavonoid IFR low borderline
HhamSuperscaffold240431070 Flavonoid IFR low borderline
HhamSuperscaffold250446540 Flavonoid IFR high pass
HhamSuperscaffold260472890 Flavonoid IFR medium pass
HhamSuperscaffold260476030 Flavonoid IFR low borderline
HhamSuperscaffold270483540 Flavonoid IFR high pass
HhamSuperscaffold270488510 Flavonoid IFR high pass
HhamSuperscaffold270488520 Flavonoid IFR high pass
HhamSuperscaffold290509900 Flavonoid IFR medium pass
HhamSuperscaffold290510630 Flavonoid IFR high pass