PlantSME Plant secondary metabolism enzyme database

Hibiscus hamabo (hibiscus_hamabo)

Imported from atlas release summary for Hibiscus hamabo.

4039
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1160 21 BAHD (466) View species results
Phenylpropanoid pathway 967 13 POD (369) View species results
Alkaloid pathway 814 27 NMT (125) View species results
Flavonoid pathway 465 14 UFGT (231) View species results
Rosmarinic acid pathway 372 7 C4H (135) View species results
Steroid pathway 261 15 CAS (118) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 4033 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 776 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: CHS
Reset
Gene Pathway Family Confidence Status Best Target
HhamSuperscaffold10031380 Flavonoid CHS medium pass CHS__00011__sp_Q9FUB7_CHSY_HYPAN
HhamSuperscaffold110090080 Flavonoid CHS medium pass CHS__00001__sp_A0A2Z5QL08_CHS_RHODA
HhamSuperscaffold130135770 Flavonoid CHS medium pass CHS__00011__sp_Q9FUB7_CHSY_HYPAN
HhamSuperscaffold190278110 Flavonoid CHS medium pass CHS__00001__sp_A0A2Z5QL08_CHS_RHODA
HhamSuperscaffold200342110 Flavonoid CHS medium pass CHS__00001__sp_A0A2Z5QL08_CHS_RHODA
HhamSuperscaffold20310100 Flavonoid CHS medium pass CHS__00011__sp_Q9FUB7_CHSY_HYPAN
HhamSuperscaffold220377430 Flavonoid CHS medium pass CHS__00011__sp_Q9FUB7_CHSY_HYPAN
HhamSuperscaffold260474760 Flavonoid CHS medium pass CHS__00001__sp_A0A2Z5QL08_CHS_RHODA
HhamSuperscaffold270479200 Flavonoid CHS medium pass CHS__00001__sp_A0A2Z5QL08_CHS_RHODA
HhamSuperscaffold290523810 Flavonoid CHS medium pass CHS__00007__sp_Q8RVK9_CHS_CANSA
HhamSuperscaffold30564440 Flavonoid CHS medium pass CHS__00001__sp_A0A2Z5QL08_CHS_RHODA
HhamSuperscaffold330651590 Flavonoid CHS medium pass CHS__00001__sp_A0A2Z5QL08_CHS_RHODA
HhamSuperscaffold340657080 Flavonoid CHS medium pass CHS__00011__sp_Q9FUB7_CHSY_HYPAN
HhamSuperscaffold360696510 Flavonoid CHS medium pass CHS__00007__sp_Q8RVK9_CHS_CANSA
HhamSuperscaffold390746620 Flavonoid CHS medium pass CHS__00001__sp_A0A2Z5QL08_CHS_RHODA
HhamSuperscaffold390746640 Flavonoid CHS medium pass CHS__00001__sp_A0A2Z5QL08_CHS_RHODA
HhamSuperscaffold400794990 Flavonoid CHS medium pass CHS__00011__sp_Q9FUB7_CHSY_HYPAN
HhamSuperscaffold60939880 Flavonoid CHS medium pass CHS__00011__sp_Q9FUB7_CHSY_HYPAN
HhamSuperscaffold91037550 Flavonoid CHS medium pass CHS__00011__sp_Q9FUB7_CHSY_HYPAN