PlantSME Plant secondary metabolism enzyme database

Hibiscus hamabo (hibiscus_hamabo)

Imported from atlas release summary for Hibiscus hamabo.

4039
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1160 21 BAHD (466) View species results
Phenylpropanoid pathway 967 13 POD (369) View species results
Alkaloid pathway 814 27 NMT (125) View species results
Flavonoid pathway 465 14 UFGT (231) View species results
Rosmarinic acid pathway 372 7 C4H (135) View species results
Steroid pathway 261 15 CAS (118) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 4033 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 776 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: FPPS
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Gene Pathway Family Confidence Status
HhamSuperscaffold100069930 Terpenoid FPPS medium pass
HhamSuperscaffold120117290 Terpenoid FPPS medium pass
HhamSuperscaffold130144270 Terpenoid FPPS medium pass
HhamSuperscaffold150179880 Terpenoid FPPS low borderline
HhamSuperscaffold160206080 Terpenoid FPPS medium pass
HhamSuperscaffold160215270 Terpenoid FPPS medium pass
HhamSuperscaffold170231260 Terpenoid FPPS low borderline
HhamSuperscaffold170240050 Terpenoid FPPS medium pass
HhamSuperscaffold190272120 Terpenoid FPPS low borderline
HhamSuperscaffold200344400 Terpenoid FPPS low borderline
HhamSuperscaffold20331140 Terpenoid FPPS medium pass
HhamSuperscaffold210369240 Terpenoid FPPS medium pass
HhamSuperscaffold240421240 Terpenoid FPPS medium pass
HhamSuperscaffold270489890 Terpenoid FPPS medium pass
HhamSuperscaffold290519320 Terpenoid FPPS medium borderline
HhamSuperscaffold30541240 Terpenoid FPPS medium pass
HhamSuperscaffold330641270 Terpenoid FPPS medium pass
HhamSuperscaffold350681310 Terpenoid FPPS low borderline
HhamSuperscaffold380719120 Terpenoid FPPS medium borderline
HhamSuperscaffold400788020 Terpenoid FPPS low borderline
HhamSuperscaffold450864800 Terpenoid FPPS medium borderline
HhamSuperscaffold60933260 Terpenoid FPPS medium pass
HhamSuperscaffold60942870 Terpenoid FPPS medium borderline
HhamSuperscaffold60959000 Terpenoid FPPS low borderline
HhamSuperscaffold70964520 Terpenoid FPPS medium pass
HhamSuperscaffold81022020 Terpenoid FPPS medium borderline
HhamSuperscaffold91044930 Terpenoid FPPS medium pass