PlantSME Plant secondary metabolism enzyme database

Hibiscus hamabo (hibiscus_hamabo)

Imported from atlas release summary for Hibiscus hamabo.

4039
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1160 21 BAHD (466) View species results
Phenylpropanoid pathway 967 13 POD (369) View species results
Alkaloid pathway 814 27 NMT (125) View species results
Flavonoid pathway 465 14 UFGT (231) View species results
Rosmarinic acid pathway 372 7 C4H (135) View species results
Steroid pathway 261 15 CAS (118) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 4033 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 776 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: ROT3/CYP90C1
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Gene Pathway Family Confidence Status
HhamSuperscaffold100057270 Steroid ROT3/CYP90C1 low borderline
HhamSuperscaffold10007970 Steroid ROT3/CYP90C1 medium borderline
HhamSuperscaffold110089470 Steroid ROT3/CYP90C1 medium borderline
HhamSuperscaffold130146580 Steroid ROT3/CYP90C1 low borderline
HhamSuperscaffold160203760 Steroid ROT3/CYP90C1 low borderline
HhamSuperscaffold160215050 Steroid ROT3/CYP90C1 medium borderline
HhamSuperscaffold170231910 Steroid ROT3/CYP90C1 medium borderline
HhamSuperscaffold180254930 Steroid ROT3/CYP90C1 low borderline
HhamSuperscaffold20333420 Steroid ROT3/CYP90C1 medium borderline
HhamSuperscaffold210362870 Steroid ROT3/CYP90C1 medium borderline
HhamSuperscaffold220378750 Steroid ROT3/CYP90C1 medium borderline
HhamSuperscaffold290517220 Steroid ROT3/CYP90C1 medium borderline
HhamSuperscaffold290517990 Steroid ROT3/CYP90C1 low borderline
HhamSuperscaffold30548870 Steroid ROT3/CYP90C1 medium borderline
HhamSuperscaffold330638640 Steroid ROT3/CYP90C1 low borderline
HhamSuperscaffold370706110 Steroid ROT3/CYP90C1 low borderline
HhamSuperscaffold370706130 Steroid ROT3/CYP90C1 low borderline
HhamSuperscaffold370706150 Steroid ROT3/CYP90C1 low borderline
HhamSuperscaffold370707720 Steroid ROT3/CYP90C1 medium borderline
HhamSuperscaffold430831710 Steroid ROT3/CYP90C1 medium borderline
HhamSuperscaffold50905960 Steroid ROT3/CYP90C1 medium borderline
HhamSuperscaffold70982430 Steroid ROT3/CYP90C1 low borderline
HhamSuperscaffold91042480 Steroid ROT3/CYP90C1 low borderline