PlantSME Plant secondary metabolism enzyme database

Hibiscus hamabo (hibiscus_hamabo)

Imported from atlas release summary for Hibiscus hamabo.

4039
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1160 21 BAHD (466) View species results
Phenylpropanoid pathway 967 13 POD (369) View species results
Alkaloid pathway 814 27 NMT (125) View species results
Flavonoid pathway 465 14 UFGT (231) View species results
Rosmarinic acid pathway 372 7 C4H (135) View species results
Steroid pathway 261 15 CAS (118) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 4033 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 776 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: PAL
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Gene Pathway Family Confidence Status Best Target
HhamSuperscaffold110075600 Flavonoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
HhamSuperscaffold160207270 Flavonoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
HhamSuperscaffold170237290 Flavonoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
HhamSuperscaffold200338100 Flavonoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
HhamSuperscaffold20300460 Flavonoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
HhamSuperscaffold20326890 Flavonoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
HhamSuperscaffold20327810 Flavonoid PAL medium pass PAL__00001__sp_P24481_PAL1_PETCR
HhamSuperscaffold20327820 Flavonoid PAL medium pass PAL__00001__sp_P24481_PAL1_PETCR
HhamSuperscaffold260475580 Flavonoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
HhamSuperscaffold320625430 Flavonoid PAL high pass PAL__00002__sp_P35510_PAL1_ARATH
HhamSuperscaffold350678620 Flavonoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
HhamSuperscaffold360690640 Flavonoid PAL medium pass PAL__00001__sp_P24481_PAL1_PETCR
HhamSuperscaffold370703820 Flavonoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
HhamSuperscaffold400784040 Flavonoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
HhamSuperscaffold40761790 Flavonoid PAL high pass PAL__00005__sp_Q50EX7_PAL1_PETHY
HhamSuperscaffold40763100 Flavonoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
HhamSuperscaffold40768070 Flavonoid PAL high pass PAL__00002__sp_P35510_PAL1_ARATH
HhamSuperscaffold40779890 Flavonoid PAL high pass PAL__00002__sp_P35510_PAL1_ARATH
HhamSuperscaffold420825610 Flavonoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
HhamSuperscaffold50890260 Flavonoid PAL high pass PAL__00005__sp_Q50EX7_PAL1_PETHY
HhamSuperscaffold50902160 Flavonoid PAL high pass PAL__00002__sp_P35510_PAL1_ARATH
HhamSuperscaffold70965690 Flavonoid PAL high pass PAL__00002__sp_P35510_PAL1_ARATH
HhamSuperscaffold110075600 Phenylpropanoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
HhamSuperscaffold160207270 Phenylpropanoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
HhamSuperscaffold170237290 Phenylpropanoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
HhamSuperscaffold200338100 Phenylpropanoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
HhamSuperscaffold20300460 Phenylpropanoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
HhamSuperscaffold20326890 Phenylpropanoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
HhamSuperscaffold20327810 Phenylpropanoid PAL medium pass PAL__00001__sp_P24481_PAL1_PETCR
HhamSuperscaffold20327820 Phenylpropanoid PAL medium pass PAL__00001__sp_P24481_PAL1_PETCR
HhamSuperscaffold260475580 Phenylpropanoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
HhamSuperscaffold320625430 Phenylpropanoid PAL high pass PAL__00002__sp_P35510_PAL1_ARATH
HhamSuperscaffold350678620 Phenylpropanoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
HhamSuperscaffold360690640 Phenylpropanoid PAL medium pass PAL__00001__sp_P24481_PAL1_PETCR
HhamSuperscaffold370703820 Phenylpropanoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
HhamSuperscaffold400784040 Phenylpropanoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
HhamSuperscaffold40761790 Phenylpropanoid PAL high pass PAL__00005__sp_Q50EX7_PAL1_PETHY
HhamSuperscaffold40763100 Phenylpropanoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
HhamSuperscaffold40768070 Phenylpropanoid PAL high pass PAL__00002__sp_P35510_PAL1_ARATH
HhamSuperscaffold40779890 Phenylpropanoid PAL high pass PAL__00002__sp_P35510_PAL1_ARATH
HhamSuperscaffold420825610 Phenylpropanoid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
HhamSuperscaffold50890260 Phenylpropanoid PAL high pass PAL__00005__sp_Q50EX7_PAL1_PETHY
HhamSuperscaffold50902160 Phenylpropanoid PAL high pass PAL__00002__sp_P35510_PAL1_ARATH
HhamSuperscaffold70965690 Phenylpropanoid PAL high pass PAL__00002__sp_P35510_PAL1_ARATH
HhamSuperscaffold110075600 Rosmarinic Acid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
HhamSuperscaffold160207270 Rosmarinic Acid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
HhamSuperscaffold170237290 Rosmarinic Acid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
HhamSuperscaffold200338100 Rosmarinic Acid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
HhamSuperscaffold20300460 Rosmarinic Acid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR
HhamSuperscaffold20326890 Rosmarinic Acid PAL high pass PAL__00001__sp_P24481_PAL1_PETCR