PlantSME Plant secondary metabolism enzyme database

Hibiscus hamabo (hibiscus_hamabo)

Imported from atlas release summary for Hibiscus hamabo.

4039
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1160 21 BAHD (466) View species results
Phenylpropanoid pathway 967 13 POD (369) View species results
Alkaloid pathway 814 27 NMT (125) View species results
Flavonoid pathway 465 14 UFGT (231) View species results
Rosmarinic acid pathway 372 7 C4H (135) View species results
Steroid pathway 261 15 CAS (118) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 4033 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 776 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: LAMT
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Gene Pathway Family Confidence Status Best Target
HhamSuperscaffold100067720 Alkaloid LAMT medium borderline LAMT__00001__sp_B2KPR3_LAMT_CATRO
HhamSuperscaffold10041270 Alkaloid LAMT medium borderline LAMT__00001__sp_B2KPR3_LAMT_CATRO
HhamSuperscaffold10041290 Alkaloid LAMT medium borderline LAMT__00001__sp_B2KPR3_LAMT_CATRO
HhamSuperscaffold140166230 Alkaloid LAMT medium borderline LAMT__00001__sp_B2KPR3_LAMT_CATRO
HhamSuperscaffold190274580 Alkaloid LAMT medium borderline LAMT__00001__sp_B2KPR3_LAMT_CATRO
HhamSuperscaffold20306700 Alkaloid LAMT medium borderline LAMT__00001__sp_B2KPR3_LAMT_CATRO
HhamSuperscaffold20331600 Alkaloid LAMT medium borderline LAMT__00001__sp_B2KPR3_LAMT_CATRO
HhamSuperscaffold210366380 Alkaloid LAMT medium borderline LAMT__00001__sp_B2KPR3_LAMT_CATRO
HhamSuperscaffold250450880 Alkaloid LAMT medium borderline LAMT__00001__sp_B2KPR3_LAMT_CATRO
HhamSuperscaffold250450890 Alkaloid LAMT medium borderline LAMT__00001__sp_B2KPR3_LAMT_CATRO
HhamSuperscaffold260474020 Alkaloid LAMT medium borderline LAMT__00001__sp_B2KPR3_LAMT_CATRO
HhamSuperscaffold260475190 Alkaloid LAMT medium borderline LAMT__00001__sp_B2KPR3_LAMT_CATRO
HhamSuperscaffold300599540 Alkaloid LAMT medium borderline LAMT__00001__sp_B2KPR3_LAMT_CATRO
HhamSuperscaffold340668630 Alkaloid LAMT medium borderline LAMT__00001__sp_B2KPR3_LAMT_CATRO
HhamSuperscaffold380719350 Alkaloid LAMT medium borderline LAMT__00001__sp_B2KPR3_LAMT_CATRO
HhamSuperscaffold400784380 Alkaloid LAMT medium borderline LAMT__00001__sp_B2KPR3_LAMT_CATRO
HhamSuperscaffold40764310 Alkaloid LAMT medium borderline LAMT__00001__sp_B2KPR3_LAMT_CATRO
HhamSuperscaffold430843500 Alkaloid LAMT medium borderline LAMT__00001__sp_B2KPR3_LAMT_CATRO
HhamSuperscaffold460879250 Alkaloid LAMT medium borderline LAMT__00001__sp_B2KPR3_LAMT_CATRO
HhamSuperscaffold50897060 Alkaloid LAMT medium borderline LAMT__00001__sp_B2KPR3_LAMT_CATRO
HhamSuperscaffold81025100 Alkaloid LAMT medium borderline LAMT__00001__sp_B2KPR3_LAMT_CATRO