PlantSME Plant secondary metabolism enzyme database

Hibiscus hamabo (hibiscus_hamabo)

Imported from atlas release summary for Hibiscus hamabo.

4039
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1160 21 BAHD (466) View species results
Phenylpropanoid pathway 967 13 POD (369) View species results
Alkaloid pathway 814 27 NMT (125) View species results
Flavonoid pathway 465 14 UFGT (231) View species results
Rosmarinic acid pathway 372 7 C4H (135) View species results
Steroid pathway 261 15 CAS (118) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 4033 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 776 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: BBE
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Gene Pathway Family Confidence Status Best Target
HhamSuperscaffold10032920 Alkaloid BBE medium borderline BBE__00005__sp_Q93ZA3_BBE13_ARATH
HhamSuperscaffold10037400 Alkaloid BBE medium borderline BBE__00005__sp_Q93ZA3_BBE13_ARATH
HhamSuperscaffold10048490 Alkaloid BBE medium borderline BBE__00005__sp_Q93ZA3_BBE13_ARATH
HhamSuperscaffold10048500 Alkaloid BBE medium borderline BBE__00005__sp_Q93ZA3_BBE13_ARATH
HhamSuperscaffold110077350 Alkaloid BBE medium borderline BBE__00003__sp_F1T161_BBLC1_TOBAC
HhamSuperscaffold140156040 Alkaloid BBE medium borderline BBE__00004__sp_O64743_BBE15_ARATH
HhamSuperscaffold160203250 Alkaloid BBE medium borderline BBE__00005__sp_Q93ZA3_BBE13_ARATH
HhamSuperscaffold160203260 Alkaloid BBE medium borderline BBE__00005__sp_Q93ZA3_BBE13_ARATH
HhamSuperscaffold160218530 Alkaloid BBE medium borderline BBE__00006__sp_Q9FI21_BBE28_ARATH
HhamSuperscaffold160218550 Alkaloid BBE medium borderline BBE__00006__sp_Q9FI21_BBE28_ARATH
HhamSuperscaffold190288170 Alkaloid BBE medium borderline BBE__00007__sp_Q9FZC4_FOX1_ARATH
HhamSuperscaffold200342510 Alkaloid BBE medium borderline BBE__00006__sp_Q9FI21_BBE28_ARATH
HhamSuperscaffold200343980 Alkaloid BBE medium borderline BBE__00004__sp_O64743_BBE15_ARATH
HhamSuperscaffold200344510 Alkaloid BBE medium borderline BBE__00006__sp_Q9FI21_BBE28_ARATH
HhamSuperscaffold200351490 Alkaloid BBE medium borderline BBE__00004__sp_O64743_BBE15_ARATH
HhamSuperscaffold200351500 Alkaloid BBE medium borderline BBE__00004__sp_O64743_BBE15_ARATH
HhamSuperscaffold200351510 Alkaloid BBE medium borderline BBE__00004__sp_O64743_BBE15_ARATH
HhamSuperscaffold200351520 Alkaloid BBE medium borderline BBE__00007__sp_Q9FZC4_FOX1_ARATH
HhamSuperscaffold200351530 Alkaloid BBE medium borderline BBE__00007__sp_Q9FZC4_FOX1_ARATH
HhamSuperscaffold200351540 Alkaloid BBE medium borderline BBE__00007__sp_Q9FZC4_FOX1_ARATH
HhamSuperscaffold200351550 Alkaloid BBE medium borderline BBE__00004__sp_O64743_BBE15_ARATH
HhamSuperscaffold200351560 Alkaloid BBE medium borderline BBE__00007__sp_Q9FZC4_FOX1_ARATH
HhamSuperscaffold20294330 Alkaloid BBE medium borderline BBE__00007__sp_Q9FZC4_FOX1_ARATH
HhamSuperscaffold20322520 Alkaloid BBE medium borderline BBE__00007__sp_Q9FZC4_FOX1_ARATH
HhamSuperscaffold210353300 Alkaloid BBE medium borderline BBE__00007__sp_Q9FZC4_FOX1_ARATH
HhamSuperscaffold230391080 Alkaloid BBE medium borderline BBE__00004__sp_O64743_BBE15_ARATH
HhamSuperscaffold230391090 Alkaloid BBE medium borderline BBE__00006__sp_Q9FI21_BBE28_ARATH
HhamSuperscaffold240419500 Alkaloid BBE medium borderline BBE__00007__sp_Q9FZC4_FOX1_ARATH
HhamSuperscaffold240423160 Alkaloid BBE medium borderline BBE__00007__sp_Q9FZC4_FOX1_ARATH
HhamSuperscaffold260462040 Alkaloid BBE low borderline BBE__00004__sp_O64743_BBE15_ARATH
HhamSuperscaffold270484170 Alkaloid BBE medium borderline BBE__00005__sp_Q93ZA3_BBE13_ARATH
HhamSuperscaffold270484200 Alkaloid BBE low borderline BBE__00003__sp_F1T161_BBLC1_TOBAC
HhamSuperscaffold30562080 Alkaloid BBE medium borderline BBE__00006__sp_Q9FI21_BBE28_ARATH
HhamSuperscaffold30562090 Alkaloid BBE medium borderline BBE__00006__sp_Q9FI21_BBE28_ARATH
HhamSuperscaffold310602050 Alkaloid BBE medium borderline BBE__00004__sp_O64743_BBE15_ARATH
HhamSuperscaffold310602060 Alkaloid BBE medium borderline BBE__00005__sp_Q93ZA3_BBE13_ARATH
HhamSuperscaffold320623660 Alkaloid BBE medium borderline BBE__00006__sp_Q9FI21_BBE28_ARATH
HhamSuperscaffold330646770 Alkaloid BBE medium borderline BBE__00007__sp_Q9FZC4_FOX1_ARATH
HhamSuperscaffold360684260 Alkaloid BBE medium borderline BBE__00007__sp_Q9FZC4_FOX1_ARATH
HhamSuperscaffold360684290 Alkaloid BBE medium borderline BBE__00007__sp_Q9FZC4_FOX1_ARATH
HhamSuperscaffold360689000 Alkaloid BBE medium borderline BBE__00005__sp_Q93ZA3_BBE13_ARATH
HhamSuperscaffold380732040 Alkaloid BBE medium borderline BBE__00006__sp_Q9FI21_BBE28_ARATH
HhamSuperscaffold390733720 Alkaloid BBE medium borderline BBE__00005__sp_Q93ZA3_BBE13_ARATH
HhamSuperscaffold390733740 Alkaloid BBE medium borderline BBE__00006__sp_Q9FI21_BBE28_ARATH
HhamSuperscaffold40751840 Alkaloid BBE low borderline BBE__00006__sp_Q9FI21_BBE28_ARATH
HhamSuperscaffold40769480 Alkaloid BBE medium borderline BBE__00006__sp_Q9FI21_BBE28_ARATH
HhamSuperscaffold40780370 Alkaloid BBE medium borderline BBE__00005__sp_Q93ZA3_BBE13_ARATH
HhamSuperscaffold410801670 Alkaloid BBE medium borderline BBE__00006__sp_Q9FI21_BBE28_ARATH
HhamSuperscaffold430831220 Alkaloid BBE medium borderline BBE__00006__sp_Q9FI21_BBE28_ARATH
HhamSuperscaffold430831230 Alkaloid BBE medium borderline BBE__00006__sp_Q9FI21_BBE28_ARATH