PlantSME Plant secondary metabolism enzyme database

Hibiscus hamabo (hibiscus_hamabo)

Imported from atlas release summary for Hibiscus hamabo.

4039
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1160 21 BAHD (466) View species results
Phenylpropanoid pathway 967 13 POD (369) View species results
Alkaloid pathway 814 27 NMT (125) View species results
Flavonoid pathway 465 14 UFGT (231) View species results
Rosmarinic acid pathway 372 7 C4H (135) View species results
Steroid pathway 261 15 CAS (118) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 4033 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 776 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: COR
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Gene Pathway Family Confidence Status
HhamSuperscaffold100064230 Alkaloid COR medium pass
HhamSuperscaffold140172260 Alkaloid COR medium pass
HhamSuperscaffold150181650 Alkaloid COR medium pass
HhamSuperscaffold150181660 Alkaloid COR medium pass
HhamSuperscaffold20327600 Alkaloid COR medium pass
HhamSuperscaffold20335420 Alkaloid COR medium pass
HhamSuperscaffold230406520 Alkaloid COR medium pass
HhamSuperscaffold240441000 Alkaloid COR medium pass
HhamSuperscaffold280506620 Alkaloid COR medium pass
HhamSuperscaffold290513600 Alkaloid COR medium pass
HhamSuperscaffold290513620 Alkaloid COR medium pass
HhamSuperscaffold300597650 Alkaloid COR low borderline
HhamSuperscaffold300599780 Alkaloid COR low borderline
HhamSuperscaffold300599790 Alkaloid COR medium pass
HhamSuperscaffold30555320 Alkaloid COR medium pass
HhamSuperscaffold30583270 Alkaloid COR medium pass
HhamSuperscaffold310609440 Alkaloid COR medium pass
HhamSuperscaffold350679580 Alkaloid COR medium pass
HhamSuperscaffold350679590 Alkaloid COR medium pass
HhamSuperscaffold400792630 Alkaloid COR low borderline
HhamSuperscaffold40780540 Alkaloid COR medium pass
HhamSuperscaffold420823490 Alkaloid COR medium pass
HhamSuperscaffold420826410 Alkaloid COR medium pass
HhamSuperscaffold420826430 Alkaloid COR medium pass
HhamSuperscaffold420826450 Alkaloid COR medium pass
HhamSuperscaffold420828900 Alkaloid COR medium pass
HhamSuperscaffold50902550 Alkaloid COR medium pass
HhamSuperscaffold50902560 Alkaloid COR medium pass
HhamSuperscaffold50903010 Alkaloid COR medium pass
HhamSuperscaffold50903020 Alkaloid COR medium pass
HhamSuperscaffold60951200 Alkaloid COR medium pass
HhamSuperscaffold60952280 Alkaloid COR medium pass
HhamSuperscaffold70965030 Alkaloid COR medium pass
HhamSuperscaffold81006300 Alkaloid COR medium pass
HhamSuperscaffold81006310 Alkaloid COR medium pass
HhamSuperscaffold81008010 Alkaloid COR medium pass
HhamSuperscaffold91030500 Alkaloid COR medium pass
HhamSuperscaffold91030530 Alkaloid COR medium pass
HhamSuperscaffold91030540 Alkaloid COR medium pass
HhamSuperscaffold91032210 Alkaloid COR medium pass
HhamSuperscaffold91034190 Alkaloid COR medium pass
HhamSuperscaffold91034200 Alkaloid COR medium pass