PlantSME Plant secondary metabolism enzyme database

Hibiscus hamabo (hibiscus_hamabo)

Imported from atlas release summary for Hibiscus hamabo.

4039
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1160 21 BAHD (466) View species results
Phenylpropanoid pathway 967 13 POD (369) View species results
Alkaloid pathway 814 27 NMT (125) View species results
Flavonoid pathway 465 14 UFGT (231) View species results
Rosmarinic acid pathway 372 7 C4H (135) View species results
Steroid pathway 261 15 CAS (118) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 4033 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 776 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: SGD
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Gene Pathway Family Confidence Status
HhamSuperscaffold100051780 Alkaloid SGD medium pass
HhamSuperscaffold10013650 Alkaloid SGD medium pass
HhamSuperscaffold10037280 Alkaloid SGD medium pass
HhamSuperscaffold110076680 Alkaloid SGD low borderline
HhamSuperscaffold140162910 Alkaloid SGD medium pass
HhamSuperscaffold150185450 Alkaloid SGD medium pass
HhamSuperscaffold150193770 Alkaloid SGD medium pass
HhamSuperscaffold160217110 Alkaloid SGD medium pass
HhamSuperscaffold200342300 Alkaloid SGD low borderline
HhamSuperscaffold200350660 Alkaloid SGD medium pass
HhamSuperscaffold20295680 Alkaloid SGD low borderline
HhamSuperscaffold20301520 Alkaloid SGD low borderline
HhamSuperscaffold220385230 Alkaloid SGD medium pass
HhamSuperscaffold280508800 Alkaloid SGD medium pass
HhamSuperscaffold300600120 Alkaloid SGD low borderline
HhamSuperscaffold300600150 Alkaloid SGD medium pass
HhamSuperscaffold30561580 Alkaloid SGD medium pass
HhamSuperscaffold30571420 Alkaloid SGD medium pass
HhamSuperscaffold310617810 Alkaloid SGD medium pass
HhamSuperscaffold340659950 Alkaloid SGD medium pass
HhamSuperscaffold340665290 Alkaloid SGD medium pass
HhamSuperscaffold360684380 Alkaloid SGD medium pass
HhamSuperscaffold360686300 Alkaloid SGD medium pass
HhamSuperscaffold370710880 Alkaloid SGD medium pass
HhamSuperscaffold400787490 Alkaloid SGD medium pass
HhamSuperscaffold400792560 Alkaloid SGD medium pass
HhamSuperscaffold40778690 Alkaloid SGD low borderline
HhamSuperscaffold420816450 Alkaloid SGD low borderline
HhamSuperscaffold440848660 Alkaloid SGD medium pass
HhamSuperscaffold460888050 Alkaloid SGD medium pass
HhamSuperscaffold50913000 Alkaloid SGD medium pass
HhamSuperscaffold70971110 Alkaloid SGD low borderline
HhamSuperscaffold70980120 Alkaloid SGD medium pass
HhamSuperscaffold70980150 Alkaloid SGD medium pass
HhamSuperscaffold70991410 Alkaloid SGD medium pass
HhamSuperscaffold81000240 Alkaloid SGD medium pass
HhamSuperscaffold81000250 Alkaloid SGD low borderline
HhamSuperscaffold81025520 Alkaloid SGD medium pass
HhamSuperscaffold91027900 Alkaloid SGD medium pass
Hhamunanchor1221056740 Alkaloid SGD medium pass
Hhamunanchor1281056920 Alkaloid SGD low borderline
Hhamunanchor5851068620 Alkaloid SGD medium pass
Hhamunanchor5871068650 Alkaloid SGD low borderline