PlantSME Plant secondary metabolism enzyme database

Hibiscus hamabo (hibiscus_hamabo)

Imported from atlas release summary for Hibiscus hamabo.

4039
Candidate Genes
105
Families
6
Pathways
Phylogenetic Position
The current species is positioned within the lineage framework used by this site. Its taxon group is highlighted below.
Species Metadata
Taxon group
Eudicots
Genome status
Genome-level resource available
Site Placement
  • This page summarizes pathway coverage, family distributions, and the gene list for the species within the current public dataset.
  • If you want to start from the public overview first, open the homepage and then return here for species-level drill-down.
  • Family statistics correspond to enzyme families, while pathway statistics correspond to the real category-level pathways.
Family Distribution
More Families (97)
Species Pathway Results
The links below show identification results for this species within each pathway, instead of opening the global pathway overview.
Pathway Candidate Genes Families Top family Results
Terpenoid pathway 1160 21 BAHD (466) View species results
Phenylpropanoid pathway 967 13 POD (369) View species results
Alkaloid pathway 814 27 NMT (125) View species results
Flavonoid pathway 465 14 UFGT (231) View species results
Rosmarinic acid pathway 372 7 C4H (135) View species results
Steroid pathway 261 15 CAS (118) View species results
Broad Catalytic Groups
P450/oxygenase and BAHD/acyltransferase are counted separately as broad catalytic groups and are not mixed into the canonical enzyme-family count.
Catalytic group Families Candidate genes Included families
P450/oxygenase 23 4033 7DLH, BR6OX1/CYP85A1, BR6OX2/CYP85A2, C3'H/CYP98A, C4H, CPD/CYP90A1, CYP51G1, CYP71, CYP719, CYP76, CYP80B1, CYP90D1, DWF4/CYP90B1, F3'5'H/CYP75A, F3'H/CYP75B, F5H/CYP84A, G8O/G8H, IFS, IO, ROT3/CYP90C1, SLS, T16H, T3O
BAHD/acyltransferase 3 776 BAHD, HCT, RAS
Identification Result List
Search the public identification results for this species; click pathway or family legends above to narrow within this species.
Current family filter: DFR
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Gene Pathway Family Confidence Status
HhamSuperscaffold100057370 Flavonoid DFR low borderline
HhamSuperscaffold10018600 Flavonoid DFR low borderline
HhamSuperscaffold10018610 Flavonoid DFR medium borderline
HhamSuperscaffold10042710 Flavonoid DFR low borderline
HhamSuperscaffold130138090 Flavonoid DFR medium borderline
HhamSuperscaffold150179200 Flavonoid DFR low borderline
HhamSuperscaffold180267470 Flavonoid DFR medium borderline
HhamSuperscaffold180268690 Flavonoid DFR medium borderline
HhamSuperscaffold20321070 Flavonoid DFR medium pass
HhamSuperscaffold210353250 Flavonoid DFR medium pass
HhamSuperscaffold220378500 Flavonoid DFR medium borderline
HhamSuperscaffold230394940 Flavonoid DFR medium pass
HhamSuperscaffold240434910 Flavonoid DFR medium pass
HhamSuperscaffold250446340 Flavonoid DFR medium borderline
HhamSuperscaffold250447140 Flavonoid DFR medium borderline
HhamSuperscaffold250452090 Flavonoid DFR low borderline
HhamSuperscaffold280499600 Flavonoid DFR medium pass
HhamSuperscaffold300591030 Flavonoid DFR medium borderline
HhamSuperscaffold310610520 Flavonoid DFR medium borderline
HhamSuperscaffold340655620 Flavonoid DFR medium borderline
HhamSuperscaffold340660950 Flavonoid DFR low borderline
HhamSuperscaffold350676940 Flavonoid DFR medium pass
HhamSuperscaffold400792090 Flavonoid DFR medium borderline
HhamSuperscaffold400792910 Flavonoid DFR medium borderline
HhamSuperscaffold40757760 Flavonoid DFR medium borderline
HhamSuperscaffold40757780 Flavonoid DFR medium borderline
HhamSuperscaffold40760070 Flavonoid DFR medium borderline
HhamSuperscaffold410803080 Flavonoid DFR medium borderline
HhamSuperscaffold460881080 Flavonoid DFR low borderline
HhamSuperscaffold60957150 Flavonoid DFR low borderline
HhamSuperscaffold70974910 Flavonoid DFR medium borderline
HhamSuperscaffold70982530 Flavonoid DFR medium borderline
HhamSuperscaffold70987070 Flavonoid DFR low borderline
HhamSuperscaffold81010370 Flavonoid DFR low borderline
Hhamunanchor1581057930 Flavonoid DFR medium pass